Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_031915.1
Length=37395
Score E
Sequences producing significant alignments: (Bits) Value
seq4953 89.7 1e-13
>seq4953
Length=802672
Score = 89.7 bits (98), Expect = 1e-13
Identities = 198/293 (68%), Gaps = 8/293 (3%)
Strand=Plus/Plus
Query 28914 CAACAACTTCTGTGACATAAACACGTTGACCTTGCTGGTTATCATAGCTACGTGTTTGAA 28973
|||| ||||| || |||||||| ||||| || |||| ||| || || | || || ||||
Sbjct 673028 CAACTACTTCGGTAACATAAACTCGTTGGCCCTGCTTGTTCTCGTAATTTCGGGTCTGAA 673087
Query 28974 TTACTCCTGTAACTCCGATAAGAGAGCCTTTTTTAGCCCAATTAACAAGATTTTCAGCTG 29033
| ||| | ||| | ||| || || || | | | || ||| ||||||||||
Sbjct 673088 TCCGACCTTCGATTCCAACAAGTGAACCCTTATGCACGAAGTTGGCAAAGTTTTCAGCTG 673147
Query 29034 ACTGTCTCCAGATAACGCAATTGATAAAATCAGCCTCACGCTCTCCAGCCTCGTTCTTAA 29093
| | || ||| ||||| || |||| || ||||| || || || ||| | || | |
Sbjct 673148 ATTTTCGCCAAATAACACAGTTGACGAAGTCAGCTTCCCGATCACCATTCGAATTGGTGA 673207
Query 29094 ATGGACGGTTTACAGCAAGAGTAAACGTAGCAA---CCGCAATATTAGATTGCGTGTATC 29150
| |||||| ||||| || ||||| ||| ||| |||| ||| ||| |||||||
Sbjct 673208 AACGACGGTCAACAGCTAGGGTAAAAGTACCAACTGCCGCGCCATT---TTGGGTGTATC 673264
Query 29151 TCAGTTCGGCATCTCTTGTAAGTCGCCCTACTAA-AACAACGTTATTTATCAT 29202
|| || | |||| ||| | || || | ||| ||| || |||| |||||
Sbjct 673265 GCAAATCAACGTCTCGTGTTAAGCGTCC-AGTAAGAACTACTGTATTAATCAT 673316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119535102011194
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |