Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20melanogaster_20[refseq_20GCF_5F000001215.4_202014-08- 01] 1,870 sequences; 143,726,002 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq450 86.0 5e-12 >seq450 Length=28110227 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 |||||||| || || | || || ||||| || || ||||| ||| ||| || ||| Sbjct 3901762 AAAATGCAGATCTTTGTGAAGACTTTGACCGGAAAGACCATCACCCTCGAGGTAGAGCCC 3901703 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | || ||||| || || || || ||||| | ||| |||| Sbjct 3901702 TCGGACACCATTGAGAATGTTAAGGCTAAGATCCAAGACAAGGAAGGAATTCCCCCAGAT 3901643 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 || || | || ||||| || ||||| ||||||||||| || || |||||||| Sbjct 3901642 CAGCAGCGTCTGATCTTCGCCGGCAAGCAACTGGAAGACGGACGCACCCTGTCCGATTAC 3901583 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGT 29170 || ||||||||||| || || |||||| |||| Sbjct 3901582 AACATTCAGAAGGAGTCCACCCTTCACTTGGT 3901551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428326237954850