Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20melanogaster_20[refseq_20GCF_5F000001215.4_202014-08- 01] 1,870 sequences; 143,726,002 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq448 84.2 5e-11 >seq448 Length=23513712 Score = 84.2 bits (92), Expect = 5e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336 || ||||| || ||||| |||||| | ||| | || ||||||||||| |||| ||| Sbjct 10326616 TTTGCCATTTACCTGGAACCCTGGCACTCGGATGTCTTTGAGTTCCTGGAACTGAAGAAG 10326557 Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396 |||| ||||| || | | || || || || || |||| ||||||| | |||| Sbjct 10326556 AACACAGGCAAAGAAGAGAATCGCGCACGCGATCTGTTTTACGCCCTGTGGATACCCGAT 10326497 Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437 | |||||| ||||| ||||| |||| |||||| |||| Sbjct 10326496 CTCTTCATGAAACGCGTGGAGGCCAACGGTGATTGGTCGCT 10326456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073740673228160