Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20melanogaster_20[refseq_20GCF_5F000001215.4_202014-08- 01] 1,870 sequences; 143,726,002 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq448 679 0.0 seq449 253 2e-62 seq450 104 2e-17 seq1 98.7 9e-16 >seq448 Length=23513712 Score = 679 bits (752), Expect = 0.0 Identities = 1289/1889 (68%), Gaps = 31/1889 (2%) Strand=Plus/Plus Query 22104 TCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGC 22163 |||||| ||| || ||||| ||||| || || || || |||||||| ||||| ||||| | Sbjct 10325242 TCTTGTTCACGGTGAACTGAATGGCATTCGCAGCTGGCTTGGTGCGCAGATAGTACATTC 10325301 Query 22164 CCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCG 22223 | || || ||||| ||||| | ||||||||||| || |||| |||||||| | | Sbjct 10325302 CGGTTTTGAGACCAGCTTTCCAGGAATAAAAATGTATGGAGGTCAGCTTTCCATAGTTTG 10325361 Query 22224 GCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGG 22283 || | ||| | | |||||||||||||||||||| || ||||| || |||||||||| Sbjct 10325362 GCTCGGCCACATGTATGTTGAACGACTGACTCTGATCTATGAACGCACCACGATCGGCGG 10325421 Query 22284 CCATATTTATCAATGTAC-GCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342 |||| || ||| || || | ||| |||||||| || ||||||||||| | | | | Sbjct 10325422 CCATTTTAATC-GTGGACTTGACCGAGATTTCCCACACCGTCTTGTACAGATCGCGCACC 10325480 Query 22343 TCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTA 22402 | ||||| | || || | |||| || || | || ||||||| || || Sbjct 10325481 TTCGGGGGTATGGTCTCAATGTTTTGGATCGATCCTCTGCTGGATATGATCTGGTTCTTC 10325540 Query 22403 ATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACT 22462 || |||| |||||| | | |||| | || | || |||| |||| ||||| Sbjct 10325541 ATGTCGTCGTCCCACAAGTCCAGCTCGGTTAGGTCGCGCAACAAATGATGGTTGACCACC 10325600 Query 22463 TGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522 || || |||||||||| || || || ||| ||||| | ||| | || ||||| ||| Sbjct 10325601 TGGAATTCGCCGGACAGAACTCGCCGGGTGTATATGTTTGTGGTGTAGGGCTCGAAGGAT 10325660 Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582 ||||| || |||| ||||||||| || || || || ||||| || || | || || ||| Sbjct 10325661 TCATTATTGCCCATTATCTGAGCTGTAGATGCCGTGGGCATGGGAGCAACAAGCAGAGAG 10325720 Query 22583 TTTCTCAAGCCGTGCTTTGAAATTTTACT-CTTGAGCATCGACCAGTCCCACAGATCGGA 22641 || | | |||||| | || | ||| ||| | || |||||||||||| | Sbjct 10325721 TTCCGGACACCGTGCATCCTAA-TGGACTCCTTCAATTTCTGCCAGTCCCACAG---GTT 10325776 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 || | ||| ||||||||||| ||||||||||| | || || |||||||||| || Sbjct 10325777 CGTTGGCACCTTGTCCCACATGTCGTATTGCAAAATTCCCTTGCTTACCGGGCTGCCCTC 10325836 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761 ||| |||||||| ||||| | || ||| ||||||||||| || ||||| ||||| || Sbjct 10325837 GTAGGTTTCGTATGGACCTTCGGTCTGGGCCAGTTCGCAGCTGGCTTCCAAGGCGCCATA 10325896 Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCAT 22821 || || || ||||| || | || ||||| |||| | ||||||||||||| | Sbjct 10325897 GTAAATCGTTTCGAATATCTGCTGATTCAAGAGACCGGCTTCTTCGCTTTCGTACGGGAA 10325956 Query 22822 ACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTT 22881 |||||| | | || || || || | ||||||| || || || | || |||| | Sbjct 10325957 ACGCATGAGAATCAAAGCATCAGCGAATCCCTGAATACCAATGCCCACGGGACGGTGCCT 10326016 Query 22882 CAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAA 22941 || ||| || ||||||| |||| |||||| | || ||| ||| | |||| | Sbjct 10326017 CAAATTGGATTTCCTTGCCTCTGGCAGAGGATAATAGTTGATATCAATTATCTTGTTTAG 10326076 Query 22942 GTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTG 23001 ||| |||| || || || || | | || || | ||| | || Sbjct 10326077 ATTTTTGGTAACTATCTTGGTGACTTCCTTGAGCTTCTTGAAATC--ATACGTC---TTC 10326131 Query 23002 TAC-----AACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCT 23056 | | |||||| |||||| ||| || ||||| | ||||| || || | ||| || Sbjct 10326132 TCCGGCGTTACAAACATGTTGAGGGCAATGGAGGCCAAGTTGCAGACTGCTATCTCATCC 10326191 Query 23057 TTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTG 23116 | | ||| ||||| ||||| ||||| | ||||| ||||| || ||||||| ||| Sbjct 10326192 GGTGCGGAGTATTCTACGATTTCCGTACACAAGTTGCTGCACTTGATTGTGCCCACATTC 10326251 Query 23117 CTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCG 23176 ||||||||| || | ||||| | |||||| | ||||||||||| | || ||||| Sbjct 10326252 TGCTGGTTGCTCTTCCTGTTGCAAGCGTCCTTGAACAGCATGTACGGATTTCCGGTCTCC 10326311 Query 23177 ACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTG 23236 || |||| ||| ||||| || ||||| | ||||| | ||| ||| | || Sbjct 10326312 ACTTGCGCCTCAATGATGGCAAACCACAGGGATTGAGCCTTAACCGTTCGGTTGGCCCGA 10326371 Query 23237 CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGG 23296 || |||| |||||| || | ||||| | || ||||| | || | |||| || Sbjct 10326372 CCCTCTTGCTCGTATTTCTCGTACAGCTTTTCGAATTCATCGCCCCACACGTCGTGGAGA 10326431 Query 23297 CCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATA 23356 || || | | || |||||||| ||| || || |||||| |||| Sbjct 10326432 CCAGGACACTTGTGGGGGCACATGAGCGACCAATCACCGTTGGCCTCCACGCGTTTCATG 10326491 Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 || ||||| |||||||| || ||||| ||||| ||||| ||||| ||| |||||||| Sbjct 10326492 AAGAGATCGGGTATCCACAGGGCGTAAAACAGATCGCGTGCGCGATTCTCTTCTTTGCCT 10326551 Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 |||||||| |||| |||| || || || || |||| ||||| || || ||||||| | Sbjct 10326552 GTGTTCTTCTTCAGTTCCAGGAACTCAAAGACATCCGAGTGCCAGGGTTCCAGGTAAATG 10326611 Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536 ||||| || || || | ||| ||| |||||||| || ||||| ||| || ||| | Sbjct 10326612 GCAAAGGCACCGGGACGCTTGCCGCCTCCCTGATCCACATAACGTGCCACATTATTGAAA 10326671 Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGA---A 23593 || || ||||| || || | || || || | || | | |||| | |||| Sbjct 10326672 ACCCTCAGCATTGGAACCAACCCATTCGAAGTTCCATTTGTG-CCGC--AAATCGATGTG 10326728 Query 23594 CCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATC 23653 || ||||| |||| | ||| |||| | || ||||| ||| | || || || ||||| Sbjct 10326729 CCCTTTGCACGAATGCAGTGTACGTTAAGTCCAATGCCACCGGCGGACTTGGAGATCATG 10326788 Query 23654 GCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAG 23713 ||||| || | || || | | | |||||||||||| ||| || | | | | | | Sbjct 10326789 GCGCACTGCTCCACAGACTTGAAAATGCCCTCGATGGAGTCGGCTGTCATGGTCAGAAGG 10326848 Query 23714 AAACACGAAGACATTTG----CGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGC 23769 |||||||| |||| || || |||| | | |||||| |||||||| || || Sbjct 10326849 AAACACGACGACAACTGCGGCCGGTTTGTG-GCAGCGGC---AAACAGTGTGGGCGATGC 10326904 Query 23770 GTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTC 23829 ||||| ||||| | | ||| | ||||| || || || | ||| ||||| || ||||| Sbjct 10326905 ATGCGTGAAGTAGCGCTCCGATAGAAGATTATAAGTTTCCACGGCCGCATCGATATCCTC 10326964 Query 23830 TCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCC 23889 ||| || || ||||| || |||||||||| ||| | || |||| ||| | | || Sbjct 10326965 TCCATGGATTCCGATCGCCACGCGCATCAGCATATGCTGCGGTCGCTCTGCGATCTTTCC 10327024 Query 23890 GTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAA 23949 ||| |||||| |||||| ||||| | || || || || |||||||||| |||| ||| Sbjct 10327025 GTTTCTTTTGAGCAGATAGGAACGCTCCAGGGTCTTGAAGCCAAAATAGTTATAGCCAAA 10327084 Query 23950 GTCACGATCGTGCACTATGGCCGAATTCA 23978 ||||||||| | | ||||| ||| |||| Sbjct 10327085 GTCACGATCATAGATTATGGACGAGTTCA 10327113 Score = 114 bits (126), Expect = 1e-20 Identities = 179/256 (70%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 31176 GGCGAATTGAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCG 31235 || || | |||| || ||||| || ||||| ||||| || || ||||| || ||||| Sbjct 10409714 GGTGACTGGAATACAAGATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACTC 10409773 Query 31236 TCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAG 31295 | || || |||||||| || | | |||||| |||||| | || |||||| |||| Sbjct 10409774 TTGAGGTCGAACCGTCGGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAG 10409833 Query 31296 GCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGA 31355 | | || || || ||||||||||| || ||||||||||| ||| ||||||| | Sbjct 10409834 GAATTCCTCCAGATCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCA 10409893 Query 31356 CTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGG 31415 | | || ||||||||||| || || || ||| | || |||| || | ||| | | Sbjct 10409894 CCCTCTCTGACTATAACATTCAGAAGGAGTCCACTTTGCACTTGGTGCTCCGCCTGCGTG 10409953 Query 31416 GCGGT----AGAAGCG 31427 | ||| ||||||| Sbjct 10409954 GTGGTGCCAAGAAGCG 10409969 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || || || ||||| || |||||| | || || || || || Sbjct 4228025 ATGCAGATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCTTCT 4228084 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||| ||||| ||| | || || || ||| Sbjct 4228085 GACACCATCGAGAATGTCAAGGCTAAGATCCAGGATAAGGAGGGCATTCCCCCAGATCAG 4228144 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| ||||| ||| |||| || ||| || ||| || ||| Sbjct 4228145 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTACAAC 4228204 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || || || || |||| || | ||| | || |||| Sbjct 4228205 ATTCAGAAGGAGTCCACCCTGCACTTGGTGCTCCGCCTGCGTGGTGGTA 4228253 >seq449 Length=25286936 Score = 253 bits (280), Expect = 2e-62 Identities = 560/828 (68%), Gaps = 34/828 (4%) Strand=Plus/Minus Query 57589 AGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATT 57648 |||| || || || || ||||| ||||| || || || |||| ||||| || | |||| Sbjct 11984312 AGGCTGAGGCTTCTTTCTGGACTGTCGAGGAGGTGGATTTGTCCAAGGACCTTACTGATT 11984253 Query 57649 GGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCG 57708 || | ||| || || ||| | |||| || |||||| | || || ||||||| Sbjct 11984252 GGCACCGCCTGAAGGACGACGAGCGCCATTTCATCTCGCACGTGCTTGCCTTCTTCGCCG 11984193 Query 57709 CATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGA 57768 | ||||| || || || |||||||| |||| || | || || || ||||| | | Sbjct 11984192 CCTCCGACGGCATCGTAAACGAGAACCTGGTGGAGCGCTTCAGTCAGGAGGTGCAGATCA 11984133 Query 57769 CGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGT 57828 ||||||| | ||||| ||||| ||||| | ||||| || |||||||| || || |||| Sbjct 11984132 CGGAGGCACGTTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAGATGT 11984073 Query 57829 ATTCGCTACTCATCGATACGTAC----GTGAAGGACAACGACGAGAAACGTAGACTGTTC 57884 | | | ||||| || ||| |||| ||| | ||||| ||| ||||| Sbjct 11984072 ACAGTGTTTTGATCGACACTTACATCCGTGATCCACACCAGCGAGA---GTAC-CTGTTT 11984017 Query 57885 AACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATCAAATGG 57941 ||||| |||||||| ||||| || | ||| |||||||| ||| | | ||| Sbjct 11984016 AACGCTATCGAAACGATGCCGGCTGTG---AAGCGCAAGGCAGACTGGGCCCTGTCCTGG 11983960 Query 57942 ATAAAAAGCGCCA---CGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAA 57998 || | ||| |||||| |||| || | | ||||| || |||||||| || Sbjct 11983959 ATCTC---CTCCAAATCGGCCAACTTCGGGGAACGCATCATCGCCTTTGCCGCCGTGGAG 11983903 Query 57999 GGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATG 58058 || || ||||| |||||||| || | || || ||| | ||||| || || |||||| Sbjct 11983902 GGCATCTTCTTCAGCGGCAGCTTCGCTTCCATTTTCTGGCTTAAGAAGCGAGGTCTGATG 11983843 Query 58059 CCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTT 58118 || || |||| || ||||||| | || || ||||||||||| | || || ||| Sbjct 11983842 CCTGGATTGACCTTCTCCAACGAGCTTATCTCTCGCGACGAGGGCTTGCACTGCGACTTT 11983783 Query 58119 G-CGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACAT 58177 | |||| || |||| | ||| | || | ||| | ||| || |||||| | || || Sbjct 11983782 GCCGTG-CTGATGTTCCAACACCTGGTGCAGCGACCCAAGCGCGAGCGCATCATCGAGAT 11983724 Query 58178 TATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCAT 58237 ||| ||| ||||| || || || | ||||| | ||||| ||||| || || | Sbjct 11983723 CATCCGCGACGCGGTGGCCATTGAGCAGGAGTTCCTTACCGATGCCCTGCCCGTCAATTT 11983664 Query 58238 GCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTT 58297 | | || ||||| || ||||||| ||||||||||||| || || ||| | ||| Sbjct 11983663 GATTGGCATGAATTGCGACCTGATGTCCCAGTACATTGAGTTCGTAGCGGAC---CGTTT 11983607 Query 58298 GCTC---GAACTG---ATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTAT 58351 |||| || || ||||| || || |||||||| ||||| || ||| | || || Sbjct 11983606 GCTCGTGGAGTTGGGCGTTGGAAAG-ATC--TACAACACCAAAAACCCCTTTAACTTCAT 11983550 Query 58352 GAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGT 58399 | | |||| ||||| || || ||||| |||||||| || || || || Sbjct 11983549 GGAGATGATATCGCTGGATGGAAAGACCAACTTTTTTGAGAAGAAGGT 11983502 >seq450 Length=28110227 Score = 104 bits (114), Expect = 2e-17 Identities = 165/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 31185 AATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTG 31244 |||| || ||||| || || || |||||| |||| || || || |||||| |||| || | Sbjct 3901767 AATCCAAAATGCAGATCTTTGTGAAGACTTTGACCGGAAAGACCATCACCCTCGAGGTAG 3901708 Query 31245 AACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGC 31304 | || || |||| | || | || || | || ||||||||||| | || | Sbjct 3901707 AGCCCTCGGACACCATTGAGAATGTTAAGGCTAAGATCCAAGACAAGGAAGGAATTCCCC 3901648 Query 31305 CCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCG 31364 | || ||||||||||| || ||||| ||||| || |||||||| || || || Sbjct 3901647 CAGATCAGCAGCGTCTGATCTTCGCCGGCAAGCAACTGGAAGACGGACGCACCCTGTCCG 3901588 Query 31365 ATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||| |||||||| || || || || ||||| |||| ||| | || | || |||| Sbjct 3901587 ATTACAACATTCAGAAGGAGTCCACCCTTCACTTGGTCCTTCGTCTCCGTGGTGGTA 3901531 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| || || || |||||| |||| || || || || Sbjct 3901075 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACCCTCGAGGTAGAGCCTTCG 3901016 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || |||||||| || | || || || ||| Sbjct 3901015 GACACCATTGAGAATGTTAAGGCTAAGATCCAAGACAAGGAGGGAATTCCCCCAGATCAG 3900956 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || ||||||||||| ||| | || || | | | || || |||||| || Sbjct 3900955 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGA-TGGACGCACCCTGTCCGATTACAA 3900897 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||| || || || || ||||| |||| ||| | || | || |||| Sbjct 3900896 CATTCAGAAGGAGTCCACCCTTCACTTGGTCCTTCGTCTTCGTGGTGGTA 3900847 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| || || || |||||| |||| || || || || Sbjct 3899707 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACCCTCGAGGTAGAGCCCTCG 3899648 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || |||||||| || | || || || ||| Sbjct 3899647 GACACCATTGAGAATGTTAAGGCTAAGATCCAAGACAAGGAGGGAATTCCCCCAGATCAG 3899588 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || ||||| ||||| ||| | || || | | | || || |||||| || Sbjct 3899587 CAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGA-TGGACGCACCCTGTCCGATTACAA 3899529 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || |||||||| ||||| |||| || Sbjct 3899528 CATCCAGAAGGAATCGACCCTTCACTTGGTGCT 3899496 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| || || || |||||| |||| || || || || Sbjct 3901531 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACCCTCGAGGTAGAGCCATCG 3901472 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || ||| ||||| || | || || || ||| Sbjct 3901471 GACACCATTGAGAATGTGAAGGCCAAGATTCAGGATAAGGAGGGAATCCCCCCAGATCAG 3901412 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || ||||||||||| ||| | || || | | | || || |||||| || Sbjct 3901411 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGA-TGGACGCACCCTGTCCGATTACAA 3901353 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || ||||| |||| ||| | || | || |||| Sbjct 3901352 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCTTCGTCTCCGTGGTGGTA 3901303 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| || || || |||||| |||| || || || || Sbjct 3899935 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACCCTCGAGGTAGAGCCTTCG 3899876 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || |||||||| || | || || || ||| Sbjct 3899875 GACACCATTGAGAATGTTAAGGCTAAGATCCAAGACAAGGAGGGAATTCCCCCAGATCAG 3899816 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || ||||| ||||| ||| | || || | | | || || |||||| || Sbjct 3899815 CAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGA-TGGACGCACCCTGTCCGATTACAA 3899757 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || ||||| |||| ||| | || | || |||| Sbjct 3899756 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCTTCGTCTCCGTGGTGGTA 3899707 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| || || || |||||| |||| || || || || Sbjct 3900163 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACCCTCGAGGTAGAGCCATCG 3900104 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || |||||||| || | || || || ||| Sbjct 3900103 GACACAATTGAGAATGTTAAGGCTAAGATCCAAGACAAGGAGGGAATTCCCCCAGATCAG 3900044 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || ||||| ||||| ||| | || || | | | || || |||||| || Sbjct 3900043 CAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGA-TGGACGCACCCTGTCCGATTACAA 3899985 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || ||||| |||| ||| | || | || |||| Sbjct 3899984 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCTTCGTCTCCGTGGTGGTA 3899935 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| || || || |||||| |||| || || || || Sbjct 3900391 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACCCTCGAGGTAGAGCCTTCG 3900332 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || |||||||| || | || || || ||| Sbjct 3900331 GACACCATTGAGAATGTTAAGGCTAAGATCCAAGACAAGGAGGGAATTCCCCCAGATCAG 3900272 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || ||||| ||||| ||| | || || | | | || || |||||| || Sbjct 3900271 CAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGA-TGGACGCACCCTGTCCGATTACAA 3900213 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || ||||| |||| ||| | || | || |||| Sbjct 3900212 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCTTCGTCTTCGTGGTGGTA 3900163 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| || || || |||||| |||| || || || || Sbjct 3900619 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACCCTCGAGGTAGAGCCATCG 3900560 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || ||| ||||| || | || || || ||| Sbjct 3900559 GACACCATTGAGAATGTGAAGGCCAAGATTCAGGATAAGGAGGGAATCCCCCCAGATCAG 3900500 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || ||||| ||||| ||| | || || | | | || || |||||| || Sbjct 3900499 CAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGA-TGGACGCACCCTGTCCGATTACAA 3900441 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || ||||| |||| ||| | || | || |||| Sbjct 3900440 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCTTCGTCTCCGTGGTGGTA 3900391 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| || || || |||||| |||| || || || || Sbjct 3900847 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACCCTCGAGGTAGAGCCATCG 3900788 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || |||||||| || | || || || ||| Sbjct 3900787 GACACAATTGAGAATGTTAAGGCTAAGATCCAAGACAAGGAGGGAATTCCCCCAGATCAG 3900728 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || ||||| ||||| ||| | || || | | | || || |||||| || Sbjct 3900727 CAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGA-TGGACGCACCCTGTCCGATTACAA 3900669 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || ||||| |||| ||| | || | || |||| Sbjct 3900668 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCTTCGTCTCCGTGGTGGTA 3900619 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||| |||| || || || |||||| |||| || || || || Sbjct 3901303 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATCACCCTCGAGGTAGAGCCATCG 3901244 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || |||||||| || | || || || ||| Sbjct 3901243 GACACAATTGAGAATGTTAAGGCTAAGATCCAAGACAAGGAGGGAATTCCCCCAGATCAG 3901184 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || ||||| ||||| ||| | || || | | | || || |||||| || Sbjct 3901183 CAGCGTCTGATCTTCGCCGGCAAGCAGCTTGAGGA-TGGACGCACCCTGTCCGATTACAA 3901125 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || ||||| |||| ||| | || | || |||| Sbjct 3901124 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCTTCGTCTCCGTGGTGGTA 3901075 >seq1 Length=23542271 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||||||||| ||||| || || ||||| || ||||| | || ||||| || Sbjct 6278751 AATATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGCCA 6278692 Query 31250 TCCGACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||| | | || |||| | | | || || ||||||||| || | || || || Sbjct 6278691 TCCGATACCATTGAGAACGTTAAGGCCAAG-ATCCAGGACAAGGAGGGAATCCCCCCAGA 6278633 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||||| | || ||||| || || ||| |||| ||| ||| || ||| || Sbjct 6278632 TCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTA 6278573 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || ||||| ||||| |||| || Sbjct 6278572 CAACATCCAGAAGGAGTCGACCCTTCACTTGGTCCT 6278537 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| | || || || || || Sbjct 6277837 CATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTCGAGCCATC 6277778 Query 31252 CGACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 ||| | | || |||| | | | ||| | ||||||||| || | || || || | Sbjct 6277777 CGATACCATTGAGAACGTTAAGGCCAAGA-TCCAGGACAAGGAGGGAATCCCCCCAGATC 6277719 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 |||||||| | || ||||| || || ||| |||| ||| ||| || ||| || | Sbjct 6277718 AGCAGCGTTTGATTTTCGCCGGAAAGCAGCTGGAGGACGGACGTACTCTGTCCGACTACA 6277659 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||| || || || ||||||||||| |||| || Sbjct 6277658 ACATCCAGAAGGAGTCGACTCTTCACTTGGTCCT 6277625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445755980210400