Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20melanogaster_20[refseq_20GCF_5F000001215.4_202014-08- 01] 1,870 sequences; 143,726,002 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq450 91.5 1e-13 >seq450 Length=28110227 Score = 91.5 bits (100), Expect = 1e-13 Identities = 105/139 (76%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 21141 GTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTGCGT 21200 ||||||||||||||| | ||| || | || || |||||||||| || | | | | | Sbjct 11112660 GTTGCCCAGATCGCCCAGGTGACGATTCTCGTCGACGGGAGCGCCATGCTCCTTGC-CAT 11112718 Query 21201 AGGG-TTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGTGAA 21259 | || || |||||| |||| ||| ||||||| ||| || |||| ||||||||||| | Sbjct 11112719 ACGGATTGAAGTGCGGTCCGGACGACATGCAGCCATTGGTGTTGTCACCGAACTCGTGCA 11112778 Query 21260 CGTGAAAGCCGTGCAGTCC 21278 |||| || |||||||| || Sbjct 11112779 CGTGGAATCCGTGCAGACC 11112797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414563351626780