Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20melanogaster_20[refseq_20GCF_5F000001215.4_202014-08- 01] 1,870 sequences; 143,726,002 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq449 125 7e-24 >seq449 Length=25286936 Score = 125 bits (138), Expect = 7e-24 Identities = 155/211 (73%), Gaps = 6/211 (3%) Strand=Plus/Plus Query 71676 ATGATGAACTATGGAATGCTGCTCAGCGACAGCT---ACGCAATGAGGGTAAAATTCACG 71732 |||| || || ||||| | || || | ||||| |||| ||||| || || |||| Sbjct 7826944 ATGACGACCTGTGGAACTCGGCGCAACTGCAGCTGGTACGC---GAGGGAAAGATGCACG 7827000 Query 71733 GATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAGG 71792 | | | |||||||||||||||||||||||||| || ||||| || || ||||| | Sbjct 7827001 GCTTTTTGCGCATGTACTGGGCCAAAAAGATTCTGGAATGGACAGCGACACCGGAGCATG 7827060 Query 71793 CGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAACG 71852 || | ||||| | || || ||||| | |||||||| || |||||||| || |||| Sbjct 7827061 CGTTGGAGTACGCAATCCTGCTGAACGACAAGTACAGTCTGGATGGTCGCGACCCCAACG 7827120 Query 71853 GTTATGTCGGTTGCATGTGGAGCATTTGCGG 71883 | ||||| || ||||||||| |||| |||| Sbjct 7827121 GCTATGTGGGCTGCATGTGGTCCATTGGCGG 7827151 Score = 125 bits (138), Expect = 7e-24 Identities = 155/211 (73%), Gaps = 6/211 (3%) Strand=Plus/Plus Query 71676 ATGATGAACTATGGAATGCTGCTCAGCGACAGCT---ACGCAATGAGGGTAAAATTCACG 71732 |||| || || ||||| | || || | ||||| |||| ||||| || || |||| Sbjct 7830054 ATGACGACCTGTGGAACTCGGCGCAACTGCAGCTGGTACGC---GAGGGAAAGATGCACG 7830110 Query 71733 GATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAGG 71792 | | | |||||||||||||||||||||||||| || ||||| || || ||||| | Sbjct 7830111 GCTTTTTGCGCATGTACTGGGCCAAAAAGATTCTGGAATGGACAGCGACACCGGAGCATG 7830170 Query 71793 CGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAACG 71852 || | ||||| | || || ||||| | |||||||| || |||||||| || |||| Sbjct 7830171 CGTTGGAGTACGCAATCCTGCTGAACGACAAGTACAGTCTGGATGGTCGCGACCCCAACG 7830230 Query 71853 GTTATGTCGGTTGCATGTGGAGCATTTGCGG 71883 | ||||| || ||||||||| |||| |||| Sbjct 7830231 GCTATGTGGGCTGCATGTGGTCCATTGGCGG 7830261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478651211266400