Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20melanogaster_20[refseq_20GCF_5F000001215.4_202014-08- 01] 1,870 sequences; 143,726,002 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq450 91.5 1e-13 >seq450 Length=28110227 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/136 (76%), Gaps = 4/136 (3%) Strand=Plus/Plus Query 107645 GTTGCCCAAATCGCCGACGTGACGCTCCGCGGCGTCGGGCGCGCCATGCTGCTGATGCG- 107703 |||||||| |||||| | |||||| | | || || |||| |||||||||| || ||| Sbjct 11112660 GTTGCCCAGATCGCCCAGGTGACGATTCTCGTCGACGGGAGCGCCATGCTCCT--TGCCA 11112717 Query 107704 TA-GGATTAAAGTGTTCGCCTGCCGACGTGCACCCATTGCTTGTGTCGCCAAATTCGTGC 107762 || ||||| ||||| || | |||| |||| |||||| | |||| || || |||||| Sbjct 11112718 TACGGATTGAAGTGCGGTCCGGACGACATGCAGCCATTGGTGTTGTCACCGAACTCGTGC 11112777 Query 107763 ACGTGAAAACCGTGCA 107778 ||||| || ||||||| Sbjct 11112778 ACGTGGAATCCGTGCA 11112793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423030358654000