Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20melanogaster_20[refseq_20GCF_5F000001215.4_202014-08-
01] 1,870 sequences; 143,726,002 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq448 140 3e-28
>seq448
Length=23513712
Score = 140 bits (154), Expect = 3e-28
Identities = 304/453 (67%), Gaps = 8/453 (2%)
Strand=Plus/Plus
Query 20135 GGAAAGGGACGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAG 20194
|||||||| || || |||||| ||| ||| | || ||||||| || | ||||
Sbjct 2968717 GGAAAGGGTCGCGGTGTGCGCTCCAGTTGCTCCTTCAGCGGCTCTACGTGGTTCAGGTAG 2968776
Query 20195 ATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCA 20254
| ||| | || |||| ||||||| ||| || || || | ||||| || ||||| |||
Sbjct 2968777 ACGTGTGTGTCGCCCATGGTGTGAACAAAGTCGCCCGGCTTCAGACCCGTCACATGGGCA 2968836
Query 20255 AGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCT 20314
| ||| | || | |||| |||| ||| ||||| || || || |||| |||||||||
Sbjct 2968837 ATCATGTGGGTGAGCAGGGCATAGGAGGCGATGTTGAAGGGTACGCCCAGGCCCATGTCT 2968896
Query 20315 CCCGACCTCTGATACAGCTGACAGGAAAGCTCACCG------TCAGCTACATAAAATTGA 20368
| ||||| || ||||| || |||||||||||| || | || ||||| ||
Sbjct 2968897 GCGCTTCTCTGGTATAGCTGGCACGAAAGCTCACCGCGCTTCTCGGAGACGTAAAACTGC 2968956
Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACAC 20428
|| |||| || ||||| || |||||| | | |||| || ||||| || ||
Sbjct 2968957 GCCAAGCAGTGGCACGGCGGCAGGGCCATCTTTGGGATGTCCAGTGGATTCCAAGCCGAC 2969016
Query 20429 ATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGG 20488
|| ||||| | | || || ||||| | || || | | | || |||
Sbjct 2969017 ATGATGATGCGACGGTCTGAGGGGTTATTCCTGATGGTGTCGATCACCTGGCGCAGCTGG 2969076
Query 20489 TCAAACCCCTGGCCTGTATAGTCAGCATC-CGCGTCCACGTACGCCGCCCCAAAGTGCCT 20547
|| | ||||| ||| | ||||| | || | || | ||||| |||||| || |||||
Sbjct 2969077 TCGATCCCCTTGCCGCTGTAGTCGTCGTCGCAGGTGC-CGTACTGCGCCCCGAAATGCCT 2969135
Query 20548 CCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580
||| ||||| ||||| || || |||| ||||||
Sbjct 2969136 CCATTGGAAGCCGTACACCGGCCCCAGATCCCC 2969168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441362482910800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |