Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20melanogaster_20[refseq_20GCF_5F000001215.4_202014-08- 01] 1,870 sequences; 143,726,002 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq450 149 1e-30 seq448 140 8e-28 seq1 122 2e-22 >seq450 Length=28110227 Score = 149 bits (164), Expect = 1e-30 Identities = 180/243 (74%), Gaps = 8/243 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | |||| ||| || || || || || || |||| Sbjct 3901533 CCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCGGAC 3901592 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||||||||||||| | ||| || || ||||||||||||||||| || ||||||| Sbjct 3901593 AGGGTGCGTCCGTCTTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTG---ATCTGGG 3901649 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||| || || ||||| || || || || || || || | || | ||| Sbjct 3901650 GGAATTCCTTCCTTGTCTTGGATCTTAGCCTTAACATTCTCAATGGTGTCCGAGGGCTCT 3901709 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG--TTAT 288481 || ||||| ||||| ||||| ||||||| |||||| || || ||||||||| || |||| Sbjct 3901710 ACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACAAAGATCTGCATTTTGGATTAT 3901769 Query 288482 TCT 288484 ||| Sbjct 3901770 TCT 3901772 Score = 143 bits (158), Expect = 6e-29 Identities = 173/233 (74%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | |||| ||| || || ||||| || || |||| Sbjct 3900393 CCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 3900452 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || |||||||| || || | || || || ||||||||||||||||| || |||| Sbjct 3900453 AGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG---ATCTGGG 3900509 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT--- 288420 |||||||| || |||||||| || || || ||||| || || || | || |||| Sbjct 3900510 GGGATTCCCTCCTTATCCTGAATCTTGGCCTTCACATTCTCAATGGTGTC---CGATGGC 3900566 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| ||||||| |||||| ||||| |||||||| Sbjct 3900567 TCTACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3900619 Score = 143 bits (158), Expect = 6e-29 Identities = 173/233 (74%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | |||| ||| || || ||||| || || |||| Sbjct 3901305 CCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 3901364 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || |||||||| || || | || || || ||||||||||||||||| || |||| Sbjct 3901365 AGGGTGCGTCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTG---ATCTGGG 3901421 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT--- 288420 |||||||| || |||||||| || || || ||||| || || || | || |||| Sbjct 3901422 GGGATTCCCTCCTTATCCTGAATCTTGGCCTTCACATTCTCAATGGTGTC---CGATGGC 3901478 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| ||||||| |||||| ||||| |||||||| Sbjct 3901479 TCTACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3901531 Score = 134 bits (148), Expect = 3e-26 Identities = 171/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | |||| ||| || || ||||| || || |||| Sbjct 3899937 CCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 3899996 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||||||| || || | || || || ||||||||||||||||| || ||||||| Sbjct 3899997 AGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG---ATCTGGG 3900053 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT--- 288420 ||||| || || || ||||| || || || || || || || | || |||| Sbjct 3900054 GGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACATTCTCAATTGTGTC---CGATGGC 3900110 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| ||||||| |||||| ||||| |||||||| Sbjct 3900111 TCTACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3900163 Score = 134 bits (148), Expect = 3e-26 Identities = 171/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | |||| ||| || || ||||| || || |||| Sbjct 3900621 CCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 3900680 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||||||| || || | || || || ||||||||||||||||| || ||||||| Sbjct 3900681 AGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG---ATCTGGG 3900737 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT--- 288420 ||||| || || || ||||| || || || || || || || | || |||| Sbjct 3900738 GGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACATTCTCAATTGTGTC---CGATGGC 3900794 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| ||||||| |||||| ||||| |||||||| Sbjct 3900795 TCTACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3900847 Score = 134 bits (148), Expect = 3e-26 Identities = 171/233 (73%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | |||| ||| || || ||||| || || |||| Sbjct 3901077 CCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 3901136 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||||||| || || | || || || ||||||||||||||||| || ||||||| Sbjct 3901137 AGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG---ATCTGGG 3901193 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT--- 288420 ||||| || || || ||||| || || || || || || || | || |||| Sbjct 3901194 GGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACATTCTCAATTGTGTC---CGATGGC 3901250 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| ||||||| |||||| ||||| |||||||| Sbjct 3901251 TCTACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3901303 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | |||| ||| || || ||||| || || |||| Sbjct 3899709 CCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 3899768 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||||||| || || | || || || ||||||||||||||||| || ||||||| Sbjct 3899769 AGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG---ATCTGGG 3899825 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || ||||| || || || || || || || | || | ||| Sbjct 3899826 GGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACATTCTCAATGGTGTCCGAAGGCTCT 3899885 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||||| |||||| ||||| |||||||| Sbjct 3899886 ACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3899935 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | |||| ||| || || ||||| || || |||| Sbjct 3900165 CCACCACGAAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGAC 3900224 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||||||| || || | || || || ||||||||||||||||| || ||||||| Sbjct 3900225 AGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG---ATCTGGG 3900281 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || ||||| || || || || || || || | || | ||| Sbjct 3900282 GGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACATTCTCAATGGTGTCCGAAGGCTCT 3900341 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||||| |||||| ||||| |||||||| Sbjct 3900342 ACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3900391 Score = 125 bits (138), Expect = 2e-23 Identities = 167/231 (72%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || ||||| | || || | |||| || ||| || ||||| || || |||| Sbjct 3899480 TCCTCCACGGAGACGGAGCACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAATCGGA 3899539 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || |||||||| || || | || || || ||||||||||||||||| || |||||| Sbjct 3899540 CAGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG---ATCTGG 3899596 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | ||||| || || || ||||| || || || || || || || | || | || Sbjct 3899597 GGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACATTCTCAATGGTGTCCGAGGGCTC 3899656 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| ||||| ||||| ||||||| |||||| ||||| |||||||| Sbjct 3899657 TACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3899707 Score = 123 bits (136), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | |||| ||| || || || || || || |||| Sbjct 3900849 CCACCACGAAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCGGAC 3900908 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||||||| || || | || || || ||||||||||||||||| || ||||||| Sbjct 3900909 AGGGTGCGTCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTG---ATCTGGG 3900965 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || ||||| || || || || || || || | || | ||| Sbjct 3900966 GGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACATTCTCAATGGTGTCCGAAGGCTCT 3901025 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||||| |||||| ||||| |||||||| Sbjct 3901026 ACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3901075 >seq448 Length=23513712 Score = 140 bits (154), Expect = 8e-28 Identities = 155/204 (76%), Gaps = 7/204 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || |||||||| | ||| ||||| || ||||| | || || || |||||| Sbjct 10409921 TCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAG 10409862 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| ||| ||||| ||||||||||| ||||| || || ||||| || Sbjct 10409861 ATCAGACGCTGCTGA---TCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACA 10409805 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| |||| ||| || ||| || || || ||||| ||||| || || || ||||| Sbjct 10409804 TTTTCGATAGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTA 10409745 Query 288460 ACGAATATCTGCATTATGTTATTC 288483 ||||| |||||||| || ||||| Sbjct 10409744 ACGAAGATCTGCATCTTG-TATTC 10409722 Score = 102 bits (112), Expect = 2e-16 Identities = 142/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||||| || ||||| || || || | || || || |||||| Sbjct 4228215 TCCTTCTGAATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAG 4228156 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| ||| |||||| || || || ||||||||||| || || || || Sbjct 4228155 ATCAGACGCTGCTGA---TCTGGGGGAATGCCCTCCTTATCCTGGATCTTAGCCTTGACA 4228099 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || | || || || | ||||| ||||| ||||| || || || Sbjct 4228098 TTCTCGATGGTGTCAGAAGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTC 4228039 Query 288460 ACGAATATCTGCATTATG 288477 ||||| |||||||| ||| Sbjct 4228038 ACGAAGATCTGCATAATG 4228021 >seq1 Length=23542271 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||||||||| || | || ||||| ||||| Sbjct 6277190 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAA 6277249 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||| || |||| |||||||| || || |||||||| || || || ||| Sbjct 6277250 ATCAAACGCTGCTG---ATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAACG 6277306 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | |||| | || || || | ||||| ||||| || || || ||||| Sbjct 6277307 TTCTCAATGGTATCGGATGGCTCGACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTA 6277366 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 6277367 ACGAAGATCTGCAT 6277380 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||||||||| || | || ||||| ||||| Sbjct 6277418 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAA 6277477 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||| || |||| |||||||| || || |||||||| || || || ||| Sbjct 6277478 ATCAAACGCTGCTG---ATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAACG 6277534 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | |||| | || || || | ||||| ||||| || || || ||||| Sbjct 6277535 TTCTCAATGGTATCGGATGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTA 6277594 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 6277595 ACGAAGATCTGCAT 6277608 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||||||||| || | || ||||| |||||| Sbjct 6278330 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAG 6278389 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||| || |||| |||||||| || || |||||||| || || || ||| Sbjct 6278390 ATCAAACGCTGCTG---ATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTTGCCTTAACG 6278446 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | |||| | || || || | ||||| ||||| || || || ||||| Sbjct 6278447 TTCTCAATGGTATCGGATGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTC 6278506 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 6278507 ACAAAGATCTGCAT 6278520 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||||||||| || | || ||||| |||||| Sbjct 6278558 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAG 6278617 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||| || |||| |||||||| || || |||||||| || || || ||| Sbjct 6278618 ATCAAACGCTGCTG---ATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAACG 6278674 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | |||| | || || || | ||||| ||||| || || || ||||| Sbjct 6278675 TTCTCAATGGTATCGGATGGCTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTA 6278734 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 6278735 ACGAAAATTTGCAT 6278748 Score = 120 bits (132), Expect = 7e-22 Identities = 169/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || | |||| || ||| || ||||| || || | Sbjct 6282497 CATG-CCACCACGCAGACGCAGGACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAAT 6282555 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || ||||||||||| || || || ||||| |||||||||| ||||||||| || Sbjct 6282556 CGGACAGAGTGCGTCCGTCCTCCAACTGCTTTCCGGCGAAGATCAAACGCTGTTG---AT 6282612 Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 || |||||||| || || || ||||| | || || |||||||| || |||| | Sbjct 6282613 CTGGGGGGATTCCCTCCTTGTCGTGGATCCTGGCCTTAACGTTTTCAATGCTATCGGATG 6282672 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| ||||| || || || ||||| || || |||||||| Sbjct 6282673 GCTCGACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 6282727 Score = 116 bits (128), Expect = 9e-21 Identities = 143/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| | ||||||||||| || | || ||||| ||||| Sbjct 6277874 TCCTTCTGGATGTTGTAGTCGGACAAAGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAA 6277933 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||| || |||| |||||||| || || |||||||| || || || ||| Sbjct 6277934 ATCAAACGCTGCTG---ATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAACG 6277990 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | |||| | || || || | ||||| ||||| || || || ||||| Sbjct 6277991 TTCTCAATGGTATCGGATGGCTCGACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTA 6278050 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 6278051 ACGAAGATCTGCAT 6278064 Score = 116 bits (128), Expect = 9e-21 Identities = 143/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||||||||| || | || ||||| ||||| Sbjct 6278102 TCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGCTGCTTTCCGGCGAAA 6278161 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||| || |||| |||||||| || || |||||||| || || || ||| Sbjct 6278162 ATCAAACGCTGCTG---ATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAACG 6278218 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | |||| | || || || | ||||| ||||| || || || ||||| Sbjct 6278219 TTCTCAATGGTATCGGATGGCTCGACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTA 6278278 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 6278279 ACAAAGATCTGCAT 6278292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179626136217860