Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20melanogaster_20[refseq_20GCF_5F000001215.4_202014-08- 01] 1,870 sequences; 143,726,002 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq448 89.7 6e-13 >seq448 Length=23513712 Score = 89.7 bits (98), Expect = 6e-13 Identities = 166/241 (69%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 171907 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGATATT 171966 ||||||||| ||| | || || ||||||||||| | || ||||| ||||| || || Sbjct 19449826 ATCTTTGCCTCCCGACAAGCGGGTACCAAATTGACCGCGTGGCTCAAGCAGATTAATGTT 19449885 Query 171967 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCAC 172025 ||| | ||||| | | | |||| || || || || ||| | ||||| || || | Sbjct 19449886 GTTGGCACCCACAAAATTCTGAGCCAGATTCACGATTGTCATCTG-TAGGGATACCTCTC 19449944 Query 172026 CGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTCATCTCAT 172085 |||| || ||||| ||| | ||||| || | | | | ||| |||||||||| |||| Sbjct 19449945 CGTGGTGATAGGCTGACATCTCCGCCACTGATCCGGATAGCTGGGCCACCTTCACCTCAC 19450004 Query 172086 CCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGT 172145 |||| ||| | | |||||| | |||| ||||| | ||| ||||| | ||| | Sbjct 19450005 GCTTGTCATTCCTCTTGAAGCAAGTGAACATCACCTTCCGCTGACCCGGCTTCAAGCCAT 19450064 Query 172146 C 172146 | Sbjct 19450065 C 19450065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597339636859600