Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20melanogaster_20[refseq_20GCF_5F000001215.4_202014-08- 01] 1,870 sequences; 143,726,002 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq451 89.7 4e-13 >seq451 Length=32079331 Score = 89.7 bits (98), Expect = 4e-13 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 108887 TCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGT 108946 ||||||||||||||||||||||||||||||| ||||||| || |||||||| |||||| Sbjct 13283523 TCGGCGAGGGATGGCACAACTACCACCACGTCTTCCCCTGGGATTACAAGGCAGCCGAGC 13283582 Query 108947 TGGG 108950 |||| Sbjct 13283583 TGGG 13283586 Score = 86.0 bits (94), Expect = 5e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 |||| | ||||||||||||||||||||||||||||| ||||||| |||||||| || | Sbjct 30186244 TGGCCATGGGCGAGGGATGGCACAACTACCACCACGTATTCCCCTGGGACTACAAAGCAG 30186185 Query 108941 CCGAGTTGGGGAACGAC 108957 | ||| |||| ||| || Sbjct 30186184 CTGAGCTGGGCAACTAC 30186168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381764099159280