Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20melanogaster_20[refseq_20GCF_5F000001215.4_202014-08- 01] 1,870 sequences; 143,726,002 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq448 91.5 2e-13 >seq448 Length=23513712 Score = 91.5 bits (100), Expect = 2e-13 Identities = 180/264 (68%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 167538 ATCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATGTT 167597 ||| ||||| ||| | ||| |||||||||||||| | |||||| || ||||| ||||| Sbjct 19449826 ATCTTTGCCTCCCGACAAGCGGGTACCAAATTGACCGCGTGGCTCAAGCAGATTAATGTT 19449885 Query 167598 ATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGT-TTCAGCGAGGGAAACTTCGC 167656 || | ||| | ||| | |||| || ||||| || || | ||||| || || | Sbjct 19449886 GTTGGCACCCACAAAATTCTGAGCCAGATTCACGATTGTCATCTG-TAGGGATACCTCTC 19449944 Query 167657 CGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCATCTCAT 167716 ||||||| || || | | || ||||| || | | | ||| || ||||||| |||| Sbjct 19449945 CGTGGTGATAGGCTGACATCTCCGCCACTGATCCGGATAGCTGGGCCACCTTCACCTCAC 19450004 Query 167717 CTTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGAGAAGGTTTGAGACCAT 167776 ||| |||| | | ||| || | |||| ||||| || ||| || || | |||| Sbjct 19450005 GCTTGTCATTCCTCTTGAAGCAAGTGAACATCACCTTCCGCTGACCCGGCTTCAAGCCAT 19450064 Query 167777 CTGCCACGTGAGCAATTGAGCGCT 167800 | ||| || ||| ||||||| Sbjct 19450065 CCACCAGACTAGGAATGGAGCGCT 19450088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588962232686000