Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20melanogaster_20[refseq_20GCF_5F000001215.4_202014-08- 01] 1,870 sequences; 143,726,002 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq449 89.7 2e-12 >seq449 Length=25286936 Score = 89.7 bits (98), Expect = 2e-12 Identities = 107/144 (74%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 443716 TCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGG 443775 |||| ||||| | || || || | || || ||||||||| || || ||||| |||||| Sbjct 11983922 TCGCCTTTGCCGCCGTGGAGGGCATCTTCTTCAGCGGCAGC-TTCGCTTCCATTTTCTGG 11983864 Query 443776 TTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGAC 443835 | || ||||| || || |||| || ||||||| ||||| || ||| ||| ||| Sbjct 11983863 CTTAAGAAGCGAGGTCTGATGCCTGGATTGACCTTCTCCAACGAGCTTATCTCTCGCGAC 11983804 Query 443836 GAGGGTTTGCATTGCGACTTCGCC 443859 ||||| ||||| |||||||| ||| Sbjct 11983803 GAGGGCTTGCACTGCGACTTTGCC 11983780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588297944462150