Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20melanogaster_20[refseq_20GCF_5F000001215.4_202014-08- 01] 1,870 sequences; 143,726,002 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq448 105 8e-18 >seq448 Length=23513712 Score = 105 bits (116), Expect = 8e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 179064 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATT 179123 ||||||||| ||| | || || ||||||||||| | ||||||||| ||||| || || Sbjct 19449826 ATCTTTGCCTCCCGACAAGCGGGTACCAAATTGACCGCGTGGCTCAAGCAGATTAATGTT 19449885 Query 179124 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCAC 179182 ||| | ||||| | | | |||| || || || || ||| | ||||| || || | Sbjct 19449886 GTTGGCACCCACAAAATTCTGAGCCAGATTCACGATTGTCATCTG-TAGGGATACCTCTC 19449944 Query 179183 CGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATCTCAT 179242 |||| || || || ||| | |||||||| || | | | ||| |||||||||| |||| Sbjct 19449945 CGTGGTGATAGGCTGACATCTCCGCCACTGATCCGGATAGCTGGGCCACCTTCACCTCAC 19450004 Query 179243 CCTTGAGGTTCTTGTGGAAGCACGCATACATCACCTT 179279 |||| ||| | | |||||| | |||||||||| Sbjct 19450005 GCTTGTCATTCCTCTTGAAGCAAGTGAACATCACCTT 19450041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618420744077200