Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20melanogaster_20[refseq_20GCF_5F000001215.4_202014-08- 01] 1,870 sequences; 143,726,002 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq448 172 2e-37 seq451 161 3e-34 seq450 161 3e-34 seq1 122 3e-22 seq453 87.8 5e-12 >seq448 Length=23513712 Score = 172 bits (190), Expect = 2e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || | || | ||| ||||| || ||||| ||||| ||||| Sbjct 10409958 ACCACCACGCAGGCGGAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGA 10409899 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || |||||||| || || || ||||| ||||| ||||| |||||||| ||||| Sbjct 10409898 GAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGG 10409839 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 |||||||||||| |||||||| || ||||| ||||| || || | ||| || ||||| || Sbjct 10409838 AATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGACGGTTCGAC 10409779 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || || || || || |||||||| Sbjct 10409778 CTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCAT 10409731 Score = 136 bits (150), Expect = 1e-26 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || || | || || || ||||| || ||||| || || || Sbjct 4228254 ATACCACCACGCAGGCGGAGCACCAAGTGCAGGGTGGACTCCTTCTGAATGTTGTAGTCG 4228195 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || ||||| || || || || || || ||||| ||||| |||||||| || Sbjct 4228194 GACAGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGG 4228135 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 ||||| || || |||||||| || ||||| || ||||| || || | ||||| || || Sbjct 4228134 GGAATGCCCTCCTTATCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAAGGCTCC 4228075 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | || | ||||| ||||| || ||||| || || |||||||| Sbjct 4228074 ACCTCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATCTGCAT 4228025 >seq451 Length=32079331 Score = 161 bits (178), Expect = 3e-34 Identities = 702/1101 (64%), Gaps = 11/1101 (1%) Strand=Plus/Minus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 ||||||||||| | ||| ||||| || | || ||||| | || ||||| || || Sbjct 24056738 AAAATGAAGGAGACTGCAGAAGCCTACCTGGGCACTACAGTGAAGGACGCTGTCATCACA 24056679 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || ||||| || || || ||||||| |||||||| |||||||| ||| || Sbjct 24056678 GTGCCGGCCTACTTCAACGACTCCCAGCGCCAGGCAACAAAGGATGCTGGTGCCATCGCT 24056619 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || | ||||| || | || || || || || || || || || | || || || || Sbjct 24056618 GGCATCAATGTGCTCCGCATCATCAACGAGCCAACAGCGGCGGCTCTGGCCTACGGCCTG 24056559 Query 349742 GATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTT 349800 || || ||| | | ||| ||| | || ||||| ||||| || ||||||||||| Sbjct 24056558 GACAAGAATCTG-AAGGGAGAGCGCAATGTGCTGATTTTCGATTTGGGCGGTGGTACTTT 24056500 Query 349801 TGATGTATCACTACTAACACTTGAAGAGGGA---ATTTTTGAAGTTAAAGCAACTGCTGG 349857 ||| || || | | || |||| |||||| | ||||| || | ||||| || Sbjct 24056499 TGACGTCTCCATCTTGACCATTGACGAGGGATCCCTGTTTGAGGTGCGCTCGACTGCGGG 24056440 Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGA 349917 || |||||||| ||||| || || || || || || | ||| || |||| | || Sbjct 24056439 AGACACACATCTGGGTGGCGAGGACTTCGACAACCGATTGGTTAACCACTTTGCCGAGGA 24056380 Query 349918 ATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAA 349976 |||||||| |||| |||| ||| | | || || | ||| ||||||| || Sbjct 24056379 GTTTAAGCG-CAAGTACAAAAAGGATCTGCGCTCCAACCCACGCGCACTGCGTCGTCTTC 24056321 Query 349977 GAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAA 350036 | || || || || || ||||| || | || || | || | | ||| | || | Sbjct 24056320 GCACGGCAGCCGAGCGCGCAAAGCGCACCCTTTCCTCCAGCACGGAGGCTTCTTTGGAGA 24056261 Query 350037 TTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAG 350096 |||| | || || || | || |||| || | | || || | || || | Sbjct 24056260 TTGACGCCCTGTACGAGGGACACGACTTCTACTCGAAGGTGAGCCGCGCCAGATTCGAGG 24056201 Query 350097 AATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATG 350156 || | || || || || | ||| |||| || || || || | | | || || | Sbjct 24056200 AACTTTGCGGTGACCTCTTCCGCAACACACTGGAGCCAGTTGAGAAGGCACTCAAGGACG 24056141 Query 350157 CAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTC 350216 | |||||| ||| | ||||| |||| |||| | ||||| || || || ||||||| Sbjct 24056140 CTAAAATGGACAAGAGCCAGATCCATGACATAGTCCTGGTTGGAGGCTCCACTCGTATTC 24056081 Query 350217 CAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCT--TCTAGATCAAT 350274 | || ||||| | | || | || || || | ||||| ||| || | ||||| Sbjct 24056080 CCAAGGTTCAGAACCTGCT-GCAGAACTTCTTCGGCGGAAAGACCCTGAACTTG-TCAAT 24056023 Query 350275 TAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAA 350334 ||||| || || || || || || || || || | |||||| | ||| | || || | Sbjct 24056022 CAATCCGGACGAGGCGGTGGCCTACGGAGCAGCCATCCAGGCAGCCATTCTGTCGGGCGA 24055963 Query 350335 TAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATT 350394 ||||| | || | ||| | |||| | ||||| | ||||| ||| | || | Sbjct 24055962 CAAGAGCAGCGAGATCAAGGATGTCCTACTGGTCGATGTTGCCCCACTCTCGTTGGGCAT 24055903 Query 350395 AGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAA 350454 |||||| | || | || ||||| || ||| | || || | || || Sbjct 24055902 AGAAACCGCCGGCGGGGTGATGACCAAGCTGATTGAGCGCAACAGCCGCATTCCATGCAA 24055843 Query 350455 AAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATT 350514 ||||| | || || | || | ||| || || ||||| ||||| || |||||||| || Sbjct 24055842 GCAGTCCAAGACCTTCACCACCTATGCCGACAACCAGCCGGCGGTGACCATTCAAGTGTT 24055783 Query 350515 TGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGA 350574 ||| || || | |||| || || || || ||| | | || ||| || | || Sbjct 24055782 TGAGGGCGAGAGGGCTCTGACCAAGGACAACAATGTATTGGGCACATTCGATCTCACTGG 24055723 Query 350575 AATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAA 350634 ||||||| || | ||||| || |||| || || |||||||| | || |||| Sbjct 24055722 CGTTCCACCCGCACCCCGTGGAGTGCCCAAGATCGACGTTACTTTCGATTTGGACGCAAA 24055663 Query 350635 TGGTATTTTAAATGTTACCGC 350655 ||||| | ||||| ||||| Sbjct 24055662 CGGTATCCTGAATGTGACCGC 24055642 Score = 89.7 bits (98), Expect = 2e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 235889 GGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAA 235948 ||||||||||| ||| ||||||| ||||||||| ||||| ||||||||| |||||| | Sbjct 17657144 GGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACGGGGATCGAT 17657203 Query 235949 ACCCAGCATCTCCA 235962 |||| ||||||||| Sbjct 17657204 ACCCCGCATCTCCA 17657217 Score = 86.0 bits (94), Expect = 2e-11 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 235881 TCAATATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCG 235940 ||| || ||||||||||| ||| ||||||| ||||||||| ||||| ||||||||| | Sbjct 17645388 TCACTAAGGGGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACGG 17645329 Query 235941 GGATCAAAACCCAGCATCTCCA 235962 ||||| | ||| ||||||||| Sbjct 17645328 GGATCGATGCCCCGCATCTCCA 17645307 >seq450 Length=28110227 Score = 161 bits (178), Expect = 3e-34 Identities = 685/1076 (64%), Gaps = 12/1076 (1%) Strand=Plus/Plus Query 349598 ACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCA 349657 || || || ||||| || | || || || || || || || || ||||||| || Sbjct 13976123 ACGGTGACAGATGCGGTGGTCACCGTTCCGGCGTACTTCAACGACTCCCAGCGCCAGGCC 13976182 Query 349658 ACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACT 349717 || || ||||| || |||||| || || ||||| || | || || || ||||| || Sbjct 13976183 ACCAAGGATGCGGGTGCCATTGCAGGATTGAATGTCCTTCGCATTATCAACGAACCAACG 13976242 Query 349718 GCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAA-GaaaaaaaTATTCTTAT 349776 || || || || || || || | ||||| | | |||| ||| |||| | | || Sbjct 13976243 GCGGCGGCCATAGCCTACGGCTTGGATAAGCAGGGC-ACCAGCGAACGAAATGTCTTGAT 13976301 Query 349777 TTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTT 349836 || || | |||||||| || || || || || | || || | || || || || || Sbjct 13976302 CTTCGACCTTGGTGGTGGCACCTTCGACGTTTCTGTGCTGACCATCGAGGATGGCATCTT 13976361 Query 349837 TGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCT 349896 || || || ||||| ||||| || || ||||| || || || || || ||||| || || Sbjct 13976362 CGAGGTGAAGGCAACCGCTGGCGACACCCATCTCGGCGGCGAGGACTTCGATAACCGGCT 13976421 Query 349897 CGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCC 349956 || || || || | || ||| |||| || ||| | ||| | || | || Sbjct 13976422 GGTGAACCACTTCGTACAGGAGTTTCAGCGCAAACATAAGAAGGATCTGGGCCAGAACAA 13976481 Query 349957 TAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTAC 350016 | || || | || || |||| ||||||||| | || || || || | || || | Sbjct 13976482 GCGGGCTTTGAGGCGACTCCGAACCGCGTGTGAAAGGGCAAAACGCACCCTCTCCTCATC 13976541 Query 350017 TACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTAT 350076 || || || || || || ||||| || ||| ||| || |||| | || | Sbjct 13976542 CACGCAGGCCAGCATCGAGATCGATTCCCTCTTTGAGGGCGTCGACTTCTACACCTCGGT 13976601 Query 350077 TACACGTGCTCGGTTTGAAGAATTATGTATGG--ATCTTTTTAGAGCAACAATGGATCCT 350134 ||||| || || || ||||| || | |||| |||| || ||| || ||||| || Sbjct 13976602 GACACGGGCCCGCTTCGAAGAGTT--GAATGGCGATCTGTTCCGAGGTACCATGGAACCA 13976659 Query 350135 GTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTA 350194 |||| || | | ||||| || ||| ||| ||||| | || | || | Sbjct 13976660 GTGGCCAAGGCGCTGCGTGATGCCAAGATGGACAAGGGCCAGATACACGACATCGTCCTT 13976719 Query 350195 GTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGC 350254 || ||||| || || | ||||| ||||| |||| | || || ||||| || ||| Sbjct 13976720 GTGGGTGGCTCCACCAGGATTCCCAAAGTGCAACGTCTGCTGCAGGACTTTTTCAACGGC 13976779 Query 350255 AAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAG 350314 || |||| | || || ||||| ||||| || ||||| ||||||||||| || ||| Sbjct 13976780 AAGGAACTAAACAAGTCCATCAATCCCGATGAGGCGGTTGCCTATGGTGCTGCAGTGCAG 13976839 Query 350315 GCATCTATTTTATCTGGAAATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGAT 350371 || | || | ||| |||| || | | | | ||||| | || || ||| Sbjct 13976840 GCGGCCATCCTCCATGGCGATAA---ATCGGAGGCAGTGCAGGATCTGCTCCTGCTGGAT 13976896 Query 350372 GTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCT 350431 || ||||| || || || || | || ||| |||| | ||| |||||| || ||| Sbjct 13976897 GTCACTCCTCTGTCTCTGGGTATTGAGACTGCTGGCGGAGTGATGACTACGCTGATTAAG 13976956 Query 350432 AGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAG 350491 || || | || |||| || || | | |||| ||| | || | ||| || || ||| Sbjct 13976957 AGGAACACCACCATACCCACCAAGCAAACGCAAATCTTTACCACTTATGCGGACAACCAG 13977016 Query 350492 CCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAA 350551 |||| || || || || || || || || || || || |||||| || | Sbjct 13977017 CCAGGTGTGCTTATCCAGGTGTTCGAGGGCGAGCGGGCGATGACGCGAGATAACAACAGC 13977076 Query 350552 CTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAA 350611 || || | ||| || | ||||||||| || | ||||| || ||| | || Sbjct 13977077 CTGGGTAAGTTTGAACTCTCGGCAATTCCACCGGCTCCACGCGGAGTGCCCCAGGTGGAG 13977136 Query 350612 GTCTCTTTCGATATTGATTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAATC 350667 || | || || || ||| | ||||| || | ||||| || ||| | || || || Sbjct 13977137 GTAACGTTTGACATCGATGCCAATGGAATACTCAATGTGACGGCACTGGAGAAGTC 13977192 Score = 158 bits (174), Expect = 4e-33 Identities = 174/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | ||||| || ||||| || ||||| || ||||| Sbjct 3901529 CATACCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATC 3901588 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || ||||| ||||| || || || ||||| ||||| |||||||| || Sbjct 3901589 GGACAGGGTGCGTCCGTCTTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGG 3901648 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||||||||| || || || || ||||| || ||||| ||||| | || || || || Sbjct 3901649 GGGAATTCCTTCCTTGTCTTGGATCTTAGCCTTAACATTCTCAATGGTGTCCGAGGGCTC 3901708 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || | ||||||||||| | || || ||||| ||||||||| Sbjct 3901709 TACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACAAAGATCTGCATT 3901760 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | ||||| || ||||| || || || || ||||| Sbjct 3901301 CATACCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATC 3901360 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || || ||||| ||||| ||||| |||||||| || Sbjct 3901361 GGACAGGGTGCGTCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGG 3901420 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || ||||| || ||||||||||| || || || ||||| ||||| | || ||||| || Sbjct 3901421 GGGGATTCCCTCCTTATCCTGAATCTTGGCCTTCACATTCTCAATGGTGTCCGATGGCTC 3901480 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||||||||| | || || || || |||||||| Sbjct 3901481 TACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3901531 Score = 150 bits (166), Expect = 5e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | ||||| || ||||| || || || || ||||| Sbjct 3900389 CATACCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATC 3900448 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || || || || ||||| ||||| |||||||| || Sbjct 3900449 GGACAGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGG 3900508 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || ||||| || ||||||||||| || || || ||||| ||||| | || ||||| || Sbjct 3900509 GGGGATTCCCTCCTTATCCTGAATCTTGGCCTTCACATTCTCAATGGTGTCCGATGGCTC 3900568 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||||||||| | || || || || |||||||| Sbjct 3900569 TACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3900619 Score = 150 bits (166), Expect = 5e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | ||||| || ||||| || ||||| || ||||| Sbjct 3900845 CATACCACCACGAAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAATC 3900904 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || || ||||| ||||| ||||| |||||||| || Sbjct 3900905 GGACAGGGTGCGTCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGG 3900964 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||||| || || || || || ||||| || ||||| ||||| | || || || || Sbjct 3900965 GGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACATTCTCAATGGTGTCCGAAGGCTC 3901024 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||||||||| | || || || || |||||||| Sbjct 3901025 TACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3901075 Score = 147 bits (162), Expect = 7e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | ||||| || ||||| || || || || ||||| Sbjct 3899933 CATACCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATC 3899992 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || || || || ||||| ||||| |||||||| || Sbjct 3899993 GGACAGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGG 3900052 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||||| || || || || || ||||| || ||||| ||||| | || ||||| || Sbjct 3900053 GGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACATTCTCAATTGTGTCCGATGGCTC 3900112 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||||||||| | || || || || |||||||| Sbjct 3900113 TACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3900163 Score = 147 bits (162), Expect = 7e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | ||||| || ||||| || || || || ||||| Sbjct 3900617 CATACCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATC 3900676 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || || || || ||||| ||||| |||||||| || Sbjct 3900677 GGACAGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGG 3900736 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||||| || || || || || ||||| || ||||| ||||| | || ||||| || Sbjct 3900737 GGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACATTCTCAATTGTGTCCGATGGCTC 3900796 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||||||||| | || || || || |||||||| Sbjct 3900797 TACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3900847 Score = 147 bits (162), Expect = 7e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | ||||| || ||||| || || || || ||||| Sbjct 3901073 CATACCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATC 3901132 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || || || || ||||| ||||| |||||||| || Sbjct 3901133 GGACAGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGG 3901192 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||||| || || || || || ||||| || ||||| ||||| | || ||||| || Sbjct 3901193 GGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACATTCTCAATTGTGTCCGATGGCTC 3901252 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||||||||| | || || || || |||||||| Sbjct 3901253 TACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3901303 Score = 141 bits (156), Expect = 3e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | ||||| || ||||| || || || || ||||| Sbjct 3899705 CATACCACCACGGAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATC 3899764 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || || || || ||||| ||||| |||||||| || Sbjct 3899765 GGACAGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGG 3899824 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||||| || || || || || ||||| || ||||| ||||| | || || || || Sbjct 3899825 GGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACATTCTCAATGGTGTCCGAAGGCTC 3899884 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||||||||| | || || || || |||||||| Sbjct 3899885 TACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3899935 Score = 141 bits (156), Expect = 3e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | ||||| || ||||| || || || || ||||| Sbjct 3900161 CATACCACCACGAAGACGAAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATC 3900220 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || || || || ||||| ||||| |||||||| || Sbjct 3900221 GGACAGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGG 3900280 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||||| || || || || || ||||| || ||||| ||||| | || || || || Sbjct 3900281 GGGAATTCCCTCCTTGTCTTGGATCTTAGCCTTAACATTCTCAATGGTGTCCGAAGGCTC 3900340 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||||||||| | || || || || |||||||| Sbjct 3900341 TACCTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAGATCTGCAT 3900391 Score = 129 bits (142), Expect = 2e-24 Identities = 154/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| ||||| || || || || || || || ||||| || | || || ||||| |||| Sbjct 3899501 CAAG-TGAAGGGTCGATTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCATCCTCAA 3899559 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || || || ||||| ||||| |||||||| || |||||||| || || || || | Sbjct 3899560 GCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCTTGGA 3899619 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | ||||| || ||||| ||||| | || || || || || || || || | ||||||| Sbjct 3899620 TCTTAGCCTTAACATTCTCAATGGTGTCCGAGGGCTCTACCTCGAGGGTGATGGTCTTTC 3899679 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| | || || || || |||||||| Sbjct 3899680 CGGTCAAAGTCTTCACGAAGATCTGCAT 3899707 >seq1 Length=23542271 Score = 122 bits (134), Expect = 3e-22 Identities = 247/365 (68%), Gaps = 5/365 (1%) Strand=Plus/Minus Query 349531 ACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTT 349590 |||||| || || || | |||||| | | || |||||||||| |||||||| ||| | Sbjct 11804161 ACCCGAGGAGATCTCCGCCATGGTTCTGGGCAAGATGAAGGAAACCGCTGAAGCTTATCT 11804102 Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650 || | | || || |||| || |||| || |||||||| || || ||||||||||| Sbjct 11804101 GGGCAAGAAGGTCACCCATGCCGTCGTTACCGTGCCAGCCTACTTCAACGATGCCCAGCG 11804042 Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 | || || || |||||||| ||||| || | | || | | || || || || Sbjct 11804041 TCAGGCCACCAAGGATGCTGGTGTTATTGCCGGTCTGCAGGTGATGCGCATCATCAACGA 11803982 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTGATAA-AATGAGTGACCAAGaaaaaaaTA 349769 |||||||||||| || ||||| || || || || || || ||| | || || || Sbjct 11803981 ACCCACTGCTGCGGCTATTGCCTACGGTCTGGACAAGAAGGAGGG----GGAGAAGAACG 11803926 Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 | ||| | || ||||| || || || || || ||||| || || || || | || | | Sbjct 11803925 TGCTTGTGTTCGATTTGGGCGGCGGCACCTTCGATGTCTCCCTGCTGACCATCGATAACG 11803866 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 || | || || || || || |||||||| ||| | || || || || || ||| Sbjct 11803865 GAGTGTTCGAGGTGGTGGCCACCAACGGTGATACTCATTTGGGAGGTGAGGACTTCGATC 11803806 Query 349890 ATCGT 349894 | ||| Sbjct 11803805 AGCGT 11803801 >seq453 Length=3667352 Score = 87.8 bits (96), Expect = 5e-12 Identities = 186/266 (70%), Gaps = 14/266 (5%) Strand=Plus/Plus Query 46570 atatcatataatttatatttttgactagatgttatcgttttacttattatattttttaaa 46629 |||| ||||| | |||||| | | || || |||| | ||| |||||||| || || | Sbjct 352982 ATATTATATATTATATATTATATATTATATATTATA-TATTATATATTATATATTATATA 353040 Query 46630 gtatttatcttaactagtagaaattctattttattaatattaactaattttttttgatta 46689 ||| ||| || || || | ||| ||| |||| |||||| || | | | || || Sbjct 353041 TTATATATTATA--TATTATATATTATATATTAT--ATATTATATATTATATATTATATA 353096 Query 46690 ttcatatataatataggattatattagtgattacaaattatac-ttatattttatattgt 46748 || |||||| ||||| || |||||| |||| | |||||| |||||| |||||| | Sbjct 353097 TT-ATATATTATATATTAT-ATATTATATATTATATATTATATATTATATATTATATATT 353154 Query 46749 ttaaatatataaatcatgg-atattttaaaaattttagtataatttGTTGGAACATATAT 46807 || || |||| || || |||| ||| | ||| || ||| |||| || | ||||| Sbjct 353155 ATATAT-TATATATTATATTATATATTATATATTATA-TATTATTTATTATATATTATAT 353212 Query 46808 GGCAT---TTATAATTATATATTATA 46830 || |||||||||||||||||| Sbjct 353213 ATTATATATTATAATTATATATTATA 353238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515218095451610