Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20miranda_20[refseq_20GCF_5F000269505.1_202013-04-19]
6 sequences; 136,728,780 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq5 174 2e-38
>seq5
Length=28826359
Score = 174 bits (192), Expect = 2e-38
Identities = 241/338 (71%), Gaps = 6/338 (2%)
Strand=Plus/Plus
Query 145606 AAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGCTC 145665
|| || || |||| ||| ||| | | | ||| | ||| | ||||| ||||| || |
Sbjct 2480112 AAATCTTCAATGTTCTCAACCTGTCGCTTGATGTTCAGCTTTGGAAACGGCCGCGGCTTG 2480171
Query 145666 CTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGG 145725
| ||||||| |||||| || || || ||||| || || || || ||||| |||| |
Sbjct 2480172 CGTTTCAGCTGCTCCTTCAGTGGATCAACATGGTTAAGATACACATGAGCGTCGCCCATG 2480231
Query 145726 ACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGG 145785
|||||| ||||| || | || | ||| || | ||||| | ||||||||||||||||
Sbjct 2480232 GTGTGGATAAAGTCGCCCGTCTTCAAGCCAGTTACATGGGCTATCATGTAGGTCAGCAGG 2480291
Query 145786 GAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGC 145845
| |||| || |||||||| ||||| || || |||||||| | |||||| ||||||
Sbjct 2480292 GCGTAGGATGCGATGTTGAATGGCACGCCAAGGCCCATGTCGGCGCTGCGCTGATACAGC 2480351
Query 145846 TGGCAGGAGAGCTCCCCGC------CCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGC 145899
|||||||| ||||| |||| || ||||||||||| ||| |||||||||
Sbjct 2480352 TGGCAGGACAGCTCTCCGCGGGTCTGCGAGACGTAGAACTGTGCCAGACAATGGCAGGGC 2480411
Query 145900 GGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGC 145937
|| || ||||| ||| | |||| || ||||| ||
Sbjct 2480412 GGGAGTGCCATTTTGGGTATGTCCAGGGGATTCCATGC 2480449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076755744240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |