Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20miranda_20[refseq_20GCF_5F000269505.1_202013-04-19]
6 sequences; 136,728,780 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq4 100 2e-16
seq3 89.7 4e-13
>seq4
Length=20862834
Score = 100 bits (110), Expect = 2e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809
||||||||||| || ||||| || | ||| || ||||| | || || ||||||
Sbjct 15862881 GCCTTTGCGGCCGTGGAAGGAATCTTCTTTAGCGGCAGCTTTGCCTCGATCTTTTGGCTG 15862822
Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869
||||| ||| |||||||| || || | || ||||||||| |||| ||||||||||
Sbjct 15862821 AAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGAGCTGATCTCCCGTGACGAA 15862762
Query 22870 GGTCTACACTGTGACTTTGC 22889
||||| ||||| ||||||||
Sbjct 15862761 GGTCTTCACTGCGACTTTGC 15862742
>seq3
Length=33007066
Score = 89.7 bits (98), Expect = 4e-13
Identities = 113/153 (74%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 33565 CGCATACCAGAGATGGGCGACAAGTTTGCAT-CGTTCACGGCCCAGAAGGGCACGTGCGG 33623
||||| ||| |||| |||||||||||||| | | |||||| |||||||| ||||| ||
Sbjct 18977883 CGCATTCCACAGATCGGCGACAAGTTTGCCTCCCGTCACGG-ACAGAAGGGAACGTGTGG 18977941
Query 33624 CATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGT 33683
|| ||| ||| ||||||||| ||||| ||| || ||| ||| || | |
Sbjct 18977942 GATCCAGTATCGGCAGGAGGACATGCCCTTCACCTGCGAGGGACTGGCCCCTGATATCAT 18978001
Query 33684 CATCAACCCGCATGCGTTCCCCTCGCGCATGAC 33716
|||||| || ||||| ||||||| || |||||
Sbjct 18978002 CATCAATCCCCATGCCATCCCCTCTCGTATGAC 18978034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356233573950418
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |