Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20miranda_20[refseq_20GCF_5F000269505.1_202013-04-19] 6 sequences; 136,728,780 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 1e-11 >seq5 Length=28826359 Score = 84.2 bits (92), Expect = 1e-11 Identities = 149/217 (69%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG----TC 33216 || |||||||| || ||||| || || || || |||||||||| | ||| | || Sbjct 15755909 ACTAAATGCAAGGTGGACTCCTTCTGAATGTTATAATCAGACA----GTGTTCGGCCATC 15755964 Query 33217 ATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC 33276 ||||||||||| ||| || || ||||| || || || | || || |||||||| || Sbjct 15755965 TTCCAATTGCTTGCCAGCGAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTC 15756024 Query 33277 GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGT 33336 ||| ||| || ||| || || || |||| || || |||||||| || Sbjct 15756025 CTGGATCTTGGCTTTGACATTTTCGATGGTATCCGAAGGTTCGACCTCAAGAGTTATGGT 15756084 Query 33337 TTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTT 33373 || ||||| || || ||||| || || |||||| || Sbjct 15756085 CTTGCCCGTTAGGGTCTTTACAAAGATCTGCATGGTT 15756121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318777576689388