Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20miranda_20[refseq_20GCF_5F000269505.1_202013-04-19]
6 sequences; 136,728,780 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq3 172 9e-39
>seq3
Length=33007066
Score = 172 bits (190), Expect = 9e-39
Identities = 199/268 (74%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||||||||| ||| || ||||||||||| || ||||| ||||| |||||
Sbjct 15151497 CGCTAAGCGTCATCGCAAGGTTCTGCGTGATAACATCCAGGGTATCACGAAGCCCGCTAT 15151438
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||| ||||||||||||| || || || ||| |||| ||| | |||| || || |
Sbjct 15151437 CCGCCGTTTGGCTCGTCGTGGCGGTGTAAAACGTATCTCGGGACTCATCTACGAGGAAAC 15151378
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
||||| || |||| | || | | | |||||||| |||||| || ||| |||||
Sbjct 15151377 TCGTGGAGTGCTGAAAGTGTTTTTGGAAAACGTTATCCGTGATGCCGTCACCTACACCGA 15151318
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|| || || | ||||| ||||| |||||||| | || ||||| |||| | |||||
Sbjct 15151317 ACATGCCAAGAGGAAGACAGTCACAGCCATGGATGTTGTGTATGCTCTGAAGAGACAAGG 15151258
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | | || ||||| || |||||
Sbjct 15151257 CCGCACGCTGTACGGTTTCGGCGGTTAA 15151230
Score = 116 bits (128), Expect = 6e-22
Identities = 109/136 (80%), Gaps = 2/136 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| || || ||||||| | |||| || ||||||||||| ||||||||||||||||| ||
Sbjct 21623386 GCCAAACGCCATCGCA-AGGTCTTGCGTGATAACATCCAGGGAATCACCAAGCCAGCCAT 21623444
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||||| ||||| || ||||| |||||| | || || ||| |||| ||||| |
Sbjct 21623445 TCGTCGTCTGGCCCGTCGCGGCGGAGTAAAGCGTATTTCAGGCTTGATCTACGAAGAAAC 21623504
Query 16552 TCGTGATGTTTTGAAG 16567
|| | ||| ||||||
Sbjct 21623505 CCGAGGTGTCTTGAAG 21623520
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075194514158
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |