Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20miranda_20[refseq_20GCF_5F000269505.1_202013-04-19] 6 sequences; 136,728,780 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq4 132 4e-26 >seq4 Length=20862834 Score = 132 bits (146), Expect = 4e-26 Identities = 201/280 (72%), Gaps = 6/280 (2%) Strand=Plus/Minus Query 37831 ACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGT 37890 ||||| | |||||||| | || || | ||||| ||||| ||||| |||||||| | Sbjct 9425850 ACGATGACCTGTGGAACTCTGCCCAGCTGCAGCTGGTGCGAGAGGGCAAGATGCACGGAT 9425791 Query 37891 ATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACC--GC 37948 | | |||||||| ||| ||||||||| | || ||| | | | || | || | || Sbjct 9425790 TTCTTCGCATGTACTGGGCCAAGAAAATACTCGAGTGGACGGCC-ACGC-CGGAGCAGGC 9425733 Query 37949 GCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACGG 38008 ||| | ||||| || || || || ||||||||| | |||||||| |||||||| || Sbjct 9425732 GCTGGAGTACGCGATCCTGCTGAACGACAAGTACAGCCTAGACGGGCGCGATCCCAATGG 9425673 Query 38009 TTACGTCGGCTGTTTGTGGTCTATATGCGGGC-TACACGATAGAGCCTGGCGCGAGATTC 38067 || || ||||| ||||||| || || |||| ||||||||| | |||| ||| Sbjct 9425672 CTATGTGGGCTGCATGTGGTCCAT-TGGGGGCATACACGATATGGGCTGGAAGGAGCGAG 9425614 Query 38068 CCATTTACGGCAAGATTCGGTACATGAACTACAACGGATG 38107 | || | ||| |||||||| ||||||||||| | ||||| Sbjct 9425613 CGATATTCGGAAAGATTCGCTACATGAACTATCAAGGATG 9425574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397062370964812