Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20miranda_20[refseq_20GCF_5F000269505.1_202013-04-19]
6 sequences; 136,728,780 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq4 152 6e-32
seq5 129 7e-25
>seq4
Length=20862834
Score = 152 bits (168), Expect = 6e-32
Identities = 322/478 (67%), Gaps = 2/478 (0%)
Strand=Plus/Plus
Query 125773 CTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAATGGGTT 125832
|||||| |||||||||||||| ||||||| ||| ||||||| |||| || || ||
Sbjct 15862468 CTTCTCAAAGAAGTTTGTCTTTCCGTCCAGCGAGATCATCTCCATGAAATTGAAAGGATT 15862527
Query 125833 CTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACGATCCGAGACGTACTC 125892
||| | ||| | || | ||| || | || || || ||||| | ||| ||||
Sbjct 15862528 CTTAGTGTTGTAGATCTTACCCACACCGAGCTCCCCTAGCAGCCGATCGGCCACGAACTC 15862587
Query 125893 AATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGGAGCGCGTCCAA 125952
||||||| ||||| || ||||||| || || | || || || || ||
Sbjct 15862588 GATGTACTGGGACATGAGAACACAGTTCATGCCAATCAAATTGACGGGCAGGGCTTCAGT 15862647
Query 125953 GATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGTGAATGGTGTCCACCCC 126012
|| |||| ||| ||| |||||||| || |||| | ||| || ||| ||| | |
Sbjct 15862648 GAGGAACTCCTGCTCGATTTCCACAGCATCCCTGATGATCTCGATGATGCGCTCC-CGCT 15862706
Query 126013 AGGTCTATTGCGCAAAGTCTTGA-AGAGTTCCACGGCAAACTCTTGGTGGAGACCCTCGT 126071
|| | ||| | | | ||| | | ||| ||||| || ||| ||||| ||||
Sbjct 15862707 TGGGCCGCTGCACTAGATGGTGATACATGAGCACCGCAAAGTCGCAGTGAAGACCTTCGT 15862766
Query 126072 CACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACC 126131
|||||||||| || || || |||||| ||| || ||||||||||| |||||||||| ||
Sbjct 15862767 CACGGGAGATCAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTCAGCC 15862826
Query 126132 AGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACGCAAAGA 126191
| || |||| ||| || ||||||||||| ||||| ||| || |||| |
Sbjct 15862827 AAAAGATCGAGGCAAAGCTGCCGCTAAAGAAGATTCCTTCCACGGCCGCAAAGGCAATAA 15862886
Query 126192 GACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCCCACTGCGCCTT 126249
|||||| |||||| | ||| || | | | ||| ||| ||||| | ||||||
Sbjct 15862887 TACGCTCGGCAAAGTTGGCCGATTTCGAGGATATCCAGGACATGGCCCAGTCCGCCTT 15862944
>seq5
Length=28826359
Score = 129 bits (142), Expect = 7e-25
Identities = 188/263 (71%), Gaps = 2/263 (1%)
Strand=Plus/Plus
Query 171908 TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGATATTG 171967
|| ||||| ||| | || || || ||||| ||||| | ||| || || | ||||| |||
Sbjct 597189 TCCTTGCCGCCCGTCAGCCGAGTACCAAACTGACCGCGCGGCTCCAGCAAGTTGATGTTG 597248
Query 171968 TTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCACC 172026
|| ||||| | ||||| | ||||| || || || || ||| | ||||||||| || ||
Sbjct 597249 TTCGAACCAACGTAGTTCTGGGCCAGATTCACGATGGTCATCTG-GAGGGAGACCTCGCC 597307
Query 172027 GTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTCATCTCATC 172086
||| |||||||||||| | ||||| || | | | || ||| |||||||||| |||
Sbjct 597308 GTGGTGGTAGGCCGACATCTCCGCCACGGAGCCAGACAGCTGGGCCACCTTCACCTCGCG 597367
Query 172087 CTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGTC 172146
|||| ||| | |||||| | |||||||||| | ||| ||||| ||||| ||
Sbjct 597368 CTTGTCGTTGCGCTTGAAGCAAGTGAACATGACCTTGCGCTGGCCGGGCTTCAGGCCATC 597427
Query 172147 GGCCATGTGCGCGATGGAACGCT 172169
||| | | |||||| ||||
Sbjct 597428 CACCAGGCTGGGGATGGAGCGCT 597450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353555198480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |