Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20miranda_20[refseq_20GCF_5F000269505.1_202013-04-19]
6 sequences; 136,728,780 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq4 145 9e-30
seq5 120 4e-22
>seq4
Length=20862834
Score = 145 bits (160), Expect = 9e-30
Identities = 294/434 (68%), Gaps = 2/434 (0%)
Strand=Plus/Plus
Query 127246 CTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCATAAAATCAAATGGGTT 127305
|||||| |||||||||||||| || || || ||| ||||||| |||| || || ||
Sbjct 15862468 CTTCTCAAAGAAGTTTGTCTTTCCGTCCAGCGAGATCATCTCCATGAAATTGAAAGGATT 15862527
Query 127306 CTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACGATCCGAGACGTACTC 127365
||| | ||| | || | ||| || | || || || ||||| | ||| ||||
Sbjct 15862528 CTTAGTGTTGTAGATCTTACCCACACCGAGCTCCCCTAGCAGCCGATCGGCCACGAACTC 15862587
Query 127366 AATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGGAGCGCGTCCAA 127425
||||||| ||||| || ||||||| || || | || || || || ||
Sbjct 15862588 GATGTACTGGGACATGAGAACACAGTTCATGCCAATCAAATTGACGGGCAGGGCTTCAGT 15862647
Query 127426 GATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTGAATAGTGTCCACCCC 127485
|| |||| ||| ||| || |||||||| |||| | ||| || || ||| | |
Sbjct 15862648 GAGGAACTCCTGCTCGATTTCCACAGCATCCCTGATGATCTCGATGATGCGCTCC-CGCT 15862706
Query 127486 AGGTCTATTGCGTAAAGTCTTGA-AGAGTTCCACAGCAAACTCTTGGTGGAGACCCTCGT 127544
|| | ||| | | ||| | | ||| ||||| || ||| ||||| ||||
Sbjct 15862707 TGGGCCGCTGCACTAGATGGTGATACATGAGCACCGCAAAGTCGCAGTGAAGACCTTCGT 15862766
Query 127545 CACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACC 127604
|||||||||| || || || |||||| |||||| ||||||||||| |||||||||| ||
Sbjct 15862767 CACGGGAGATCAGCTCGTTGGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTCAGCC 15862826
Query 127605 AGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAATA 127664
| || |||| ||| ||| |||||||| || ||||| ||| || |||| |
Sbjct 15862827 AAAAGATCGAGGCAAAGCTGCCGCTAAAGAAGATTCCTTCCACGGCCGCAAAGGCAATAA 15862886
Query 127665 GACGCTCGGCAAAG 127678
|||||||||||||
Sbjct 15862887 TACGCTCGGCAAAG 15862900
>seq5
Length=28826359
Score = 120 bits (132), Expect = 4e-22
Identities = 186/263 (71%), Gaps = 2/263 (1%)
Strand=Plus/Plus
Query 175928 TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATTG 175987
|| ||||| ||| | || || || ||||| ||||| | ||||| || | ||||| |||
Sbjct 597189 TCCTTGCCGCCCGTCAGCCGAGTACCAAACTGACCGCGCGGCTCCAGCAAGTTGATGTTG 597248
Query 175988 TTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTTCACC 176046
|| || || | |||| | |||| || || || || ||| | ||||||||| || ||
Sbjct 597249 TTCGAACCAACGTAGTTCTGGGCCAGATTCACGATGGTCATCTG-GAGGGAGACCTCGCC 597307
Query 176047 GTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATCTCATC 176106
||| |||||||||||| | |||||||| | | | || ||| |||||||||| |||
Sbjct 597308 GTGGTGGTAGGCCGACATCTCCGCCACGGAGCCAGACAGCTGGGCCACCTTCACCTCGCG 597367
Query 176107 CTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGTC 176166
|||| ||| | |||||| | |||||||||| | ||| ||||| ||||| ||
Sbjct 597368 CTTGTCGTTGCGCTTGAAGCAAGTGAACATGACCTTGCGCTGGCCGGGCTTCAGGCCATC 597427
Query 176167 GGCCATGTGTGCGATGGAACGCT 176189
||| | | |||||| ||||
Sbjct 597428 CACCAGGCTGGGGATGGAGCGCT 597450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507153986960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |