Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20miranda_20[refseq_20GCF_5F000269505.1_202013-04-19] 6 sequences; 136,728,780 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3 343 2e-89 seq1 145 1e-29 >seq3 Length=33007066 Score = 343 bits (380), Expect = 2e-89 Identities = 758/1127 (67%), Gaps = 12/1127 (1%) Strand=Plus/Plus Query 7019 AAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTA 7078 ||||||||||| ||||| | || || || || || ||||||||||| || |||| || Sbjct 2875058 AAGATGGCGGCCTGGACAGCGGCACCATAGGCAACAGCCTCATCGGGATTGATCGACTTG 2875117 Query 7079 TTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTC 7138 ||||| || || ||||| || |||| | || | || | || ||||| || || Sbjct 2875118 TTCAGCTCCTTGCCGTTGAACAGATCCTGGAGCAGGCGCTGCACCTTGGGGATACGGGTA 2875177 Query 7139 GATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGT 7198 || ||||||||||| || || || | | ||| || || | ||| | ||| || || Sbjct 2875178 GAGCCACCGACCAACACAATGTCGTGGATGACCGACTTGTCCAGCTTGGCGTCACGCAGA 2875237 Query 7199 GTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGT 7258 | || || || || ||||| | ||||||| || ||| ||||| ||||| Sbjct 2875238 GCCTTCTCCACGGGGTCCATGGTGCTGCGGAACAGATCGGCGTTCAGCTCCTCGAAACGG 2875297 Query 7259 GCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTT 7318 ||||| || || || || |||||||| || ||| | | || ||||| |||||| | Sbjct 2875298 GCACGAGTGATCGAGGTGTAGAAATCGGTACCCTCGAACAGAGAGTCAATCTCAATGCTG 2875357 Query 7319 GTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGA 7378 | || | | ||| || | || |||||||||||||| || || || || | ||||||| Sbjct 2875358 GCCTGGGTGGACGACGAGAGGGTACGCTTTGCGCGCTCGCAGGCGGTGCGCAGACGACGA 2875417 Query 7379 AGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACT-CTTCAGAGAA 7437 || |||||| ||| | || | || ||||| || || || || |||| || || | || Sbjct 2875418 AGAGCACGCTTGTTGCTGGTCAGGTCCTTCTTGTGCTTGCGCTTGAACTCCTGCACA-AA 2875476 Query 7438 GTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGC 7497 ||| | || | |||||||| |||||||| | || ||||| || || || | Sbjct 2875477 GTGGGTCACTAGACGGTTGTCGAAATCCTCACCACCAAGATGGGTATCACCGGCCGTAGA 2875536 Query 7498 TTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACC 7557 |||||| || ||||| || | || || | | || ||||| || ||||| ||||| Sbjct 2875537 TTTGACCTCGAAGATGCCGTCATCGATCGACAGAATGGACACATCGAAGGTACCGCCACC 2875596 Query 7558 CAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGAT 7617 ||| || ||||| || ||||| || | | ||||| || || || || ||||| Sbjct 2875597 CAGATCGAAAATAAGCACGTTGCGCTCACCAACAGCCTTCTTGTCCAGGCCATAGGCGAT 2875656 Query 7618 AGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCG 7676 ||| || ||||| || || || || ||||| || ||| |||| || ||||| || | | Sbjct 2875657 AGCAGCGGCCGTGGGCTCGTTGATGATACGCAGCACA-TTCAATCCGGCAATGGTACCGG 2875715 Query 7677 CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736 |||| || ||||| || || || || ||||| |||||||| || || || | ||| || | Sbjct 2875716 CATCCTTGGTCGCCTGACGCTGAGAGTCGTTGAAGTAGGCTGGCACAGTGATGACGGCAT 2875775 Query 7737 CCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCG 7796 || ||| |||| || || |||| || ||| | || ||||||||||| | ||||| | Sbjct 2875776 TCGACACTGTCTTGCCCAGGTACGCCTCGGCGGTCTCCTTCATTTTGGTCAACACCATGG 2875835 Query 7797 ATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATG 7855 | || ||||| || | | | | || ||| | ||| | || | ||| |||||| || Sbjct 2875836 AGGAGATCTCCTC-GGGGAAGAAGGTCTTCTTCTCATCCTTGTACGTAACCTCAATCTTG 2875894 Query 7856 GGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACC 7915 || || | | ||| || || | | | ||| | ||||| || || || Sbjct 2875895 GGCTTGCCATCTACAC---TGACCACATCGAAGGGCCAGTGCTTCATGTCAGACTGCACA 2875951 Query 7916 TGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGG 7975 ||| |||||| | || || |||||||| ||||| || | || | | ||| Sbjct 2875952 GCAGAATCCTCAAACTTGCGACCAATCAGACGCTTGGCATCGAAGATCGTTTGGGTTGGG 2876011 Query 7976 TTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAAC 8035 ||||| || || ||||| || || || || || | ||| || | ||||| || Sbjct 2876012 TTCATCGCCACCTGATTCTTGGCGGCATCACCAATCAAACGCTC---CGTGTCCGTGAAG 2876068 Query 8036 GCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCG 8095 || || || ||||| ||||| ||||| || |||||||| ||||| || || || | | Sbjct 2876069 GCAACATAGGATGGTGTCGTACGATTACCCTGGTCGTTGGCAATGATCTCGACCTTGCCA 2876128 Query 8096 TTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACC 8142 | || | || || || || || || ||||| || ||||||||||| Sbjct 2876129 TGCTGGAACACACCCACACAAGAGTAGGTTGTGCCCAAATCAATACC 2876175 Score = 241 bits (266), Expect = 2e-58 Identities = 759/1160 (65%), Gaps = 32/1160 (3%) Strand=Plus/Minus Query 7019 AAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTA 7078 ||||||||||| ||||| | || || || || || ||||||||||| | |||| || Sbjct 3146583 AAGATGGCGGCCTGGACGGCGGCACCATAGGCAACAGCCTCATCGGGATCGATCGACTTG 3146524 Query 7079 TTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTC 7138 ||||| || || ||||| || |||| | || | || | || || || || || Sbjct 3146523 TTCAGCTCCTTGCCGTTGAATAGATCCTGGAGCAGGCGCTGCACCTTGGGAATACGGGTG 3146464 Query 7139 GATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGT 7198 || |||||||||| || || || | | ||| || || | ||| | ||| || || Sbjct 3146463 GAGCCACCGACCAGCACAATGTCGTGGATGGCCGACTTGTCCAGCTTGGCGTCACGCAGA 3146404 Query 7199 GTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGT 7258 | || || || | ||||| | ||||||| || ||| ||||| ||||| Sbjct 3146403 GCCTTCTCCACGCGATCCATGGTGCTGCGGAACAGATCGGCGTTCAGCTCCTCGAAACGG 3146344 Query 7259 GCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTT 7318 ||||| || || || || |||||||| || ||| | | || ||||| ||||| | Sbjct 3146343 GCACGAGTGATCGAGGTGTAGAAATCGGTACCCTCGAACAGAGAGTCAATCTCAATTCTG 3146284 Query 7319 GTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGA 7378 | | | ||||| || | || |||||||||||||| || || || || | |||||| Sbjct 3146283 GCCAGAGTGGTCGACGAGAGGGTGCGCTTTGCGCGCTCGCAGGCGGTGCGCAGACGACGC 3146224 Query 7379 AGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT-CAGAGAA 7437 || |||||| ||| | || | || ||||| || || || || ||||| | || | || Sbjct 3146223 AGAGCACGCTTGTTGCTGGTCAGGTCCTTCTTGTGATTGCGATTGAACTCCTGCACA-AA 3146165 Query 7438 GTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGC 7497 ||| | || | |||||||| ||||||| | || ||||| || || || | Sbjct 3146164 GTGGGTCACTAGACGGTTGTCGAAATCCGCACCACCAAGATGGGTATCACCGGCCGTAGA 3146105 Query 7498 TTTGACTTCAAAGATACC-TCCTTCAATGTTTAACAACGAA-ACATCAAACGTACCACCA 7555 |||||| | ||||| || || || | | || || | | ||||| || ||||| ||| Sbjct 3146104 TTTGACCTTGAAGATGCCATCATTGATCGA--AAGAATGGACACATCGAAGGTACCGCCA 3146047 Query 7556 CCCAGGTCAAAAATGAGTACGTT---CGTATCGTCGTCTTTGTTCTTATCGAGACCGTAC 7612 ||||| || ||||| || ||||| | || | | | || ||| || || || || Sbjct 3146046 CCCAGATCGAAAATAAGCACGTTGCGCTTACCAACAGCCTT---CTTGTCCAGGCCATAG 3145990 Query 7613 GCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGT 7671 |||||||| || ||||| || || || || ||||| || ||| |||| || || || || Sbjct 3145989 GCGATAGCAGCGGCCGTGGGCTCGTTGATGATACGCAGCACA-TTCAAACCGGCGATGGT 3145931 Query 7672 TGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 | ||||| || || || || || ||||| ||||| |||| ||| || || | | ||| Sbjct 3145930 ACCGGCATCCTTGGTAGCCTGACGCTGCGAGTCGTTGAAGTGGGCTGGCACAGAGATGAC 3145871 Query 7732 CGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791 || | || || |||| || || ||| || ||| | || ||||||||||| | || Sbjct 3145870 AGCATTGGTCACCGTCTTGCCCAGGTACTCCTCGGCGGTCTCCTTCATTTTGGTCAACAC 3145811 Query 7792 CATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAA 7850 ||| | || ||||| || | || | | || || | || | || | ||| |||| Sbjct 3145810 CATGGCAGAGATCTCCTC-GGCGAAGAAGGTCTTTTTCTCGTCCTTGTACGTAACCTCAA 3145752 Query 7851 TCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTT 7910 || | || || | | ||| || || | | | ||| | ||||| || | Sbjct 3145751 TCTTAGGCTTGCCGTCTACAC---TGACCACATCGAAGGGCCAGTGCTTCATGTCAGACT 3145695 Query 7911 GGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAA--CTGTGTT 7968 | || ||| |||||| | || || |||||||| | ||| || | ||||| | Sbjct 3145694 GCACAGCAGAATCCTTAAACTTGCGACCAATCAGACGCTTCGAATCGAAGATCCTGTGGT 3145635 Query 7969 TTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTC 8028 | |||| | || |||||||| || || || || || | || || | || Sbjct 3145634 GT--GGGTGTACCGCCACCTGGTTCTTGGCGGCATCACCAATTAAGCGCTC---CGTGTC 3145580 Query 8029 CGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088 ||| || || || || |||| || || ||||| || |||||||| ||||| || || || Sbjct 3145579 CGTGAAGGCAACATAGGATGATGTGGTACGATTACCATGGTCGTTGGCAATGATCTCGAC 3145520 Query 8089 GCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGAT--- 8145 | | || || | || || || || | | ||||| || ||||||||||| || Sbjct 3145519 CTTGCCATTCTGGAACACACCCACACAGCAGTGAGTTGTGCCCAAATCAATACCAATAGC 3145460 Query 8146 ---TGCTTGAGTCATTTTAT 8162 ||||| || ||| |||| Sbjct 3145459 AGGTGCTTCAGACATCTTAT 3145440 Score = 199 bits (220), Expect = 5e-46 Identities = 604/917 (66%), Gaps = 22/917 (2%) Strand=Plus/Plus Query 7241 CACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAAC 7300 ||||||||||| |||||||| ||| | || || ||| | || ||| ||| | | Sbjct 27395056 CACAGTTCCTCGAAACGTGCGCGGCTCATCTTGGTGTAGTAGTCGTGGCCCTCGAACAGA 27395115 Query 7301 GAATCAATTTCAATGGTTG--TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358 | || || |||||||| | | |||| | || || | || ||||| || ||||| Sbjct 27395116 GCGTCTATCTCAATGGTCGCCTCCGTGC--TGGAGGAGAGGGTGCGCTTCGCCCGCTCGG 27395173 Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTAC 7418 ||||||||| | || || || ||||| ||||| | | ||| ||||| ||||| Sbjct 27395174 CCGCCGTTCGGAGGCGTCGCAGAGCACGAGGGTTGGAGCGCAGATCCTTCTTGAATTTAC 27395233 Query 7419 GTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGT 7478 | || ||||| || | | |||| | |||| || || || || || |||| || Sbjct 27395234 GCTTGAACTCGTCTGCCAGGTGTGTGACCAGTCGGTTGTCAAAGTCCTCGCCGCCCAGGT 27395293 Query 7479 GTGTATCCCCCGCGGTCGCTTTGACTTCAAA----GATACCTCCTTCAATGTTTAACAAC 7534 | || || || || || || || ||||| ||| ||| | || ||| | | | Sbjct 27395294 GGGTGTCTCCGGCAGTGGCCCGCACCTCAAACAGGGATCCCT-CGTCGATGGTCAGGATG 27395352 Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG 7594 || || || || || || || |||||||| || ||||| ||||| || | | Sbjct 27395353 GACACGTCGAAGGTTCCGCCGCCCAGGTCGAAGATGAGCACGTTGCGCTCACCCTTCAGA 27395412 Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC-GAAGACA 7653 ||||| || || || || || | || |||||||| || ||||| | || | || ||| Sbjct 27395413 TTCTTGTCCAG-CCATAGGCCAGCGCGGCCGCCGTCGGCTCATTGACGATTCTGAGCACA 27395471 Query 7654 GTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGT 7712 || ||||| || || | ||| ||||| ||||| || || || || || ||||| |||| Sbjct 27395472 -TTGAGGCCTGCGAT-GCGGCCAGCATCCTTCGTGGCCTGGCGCTGTGAGTCGTTGAAGT 27395529 Query 7713 AGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATAT 7772 |||| || || || | ||| ||||| |||| ||| || ||||| | || || | | Sbjct 27395530 AGGCAGGCACTGTGATGACTGCGTCTGTGATGGTCTGGCCCAGATAAGCCTCGGCCGTCT 27395589 Query 7773 CTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCAC 7832 | ||||||||| || |||||||| ||||| || | | ||| | |||| ||| | Sbjct 27395590 CCTTCATTTTGACCAGCACCATCGAGCTGATCTCCTCCGGGGAAAAGCGCTTCGCTTCGC 27395649 Query 7833 CGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACC 7892 | || || ||||| ||||| | || || || | || || | ||||| ||| || Sbjct 27395650 CCTTGAACTCAACGCCAATCTTTGGCTT-GCCTC--CATCGCTTACCACCTTGAACGGCC 27395706 Query 7893 AATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTG 7952 | | || || || || | || | || || | | || || || ||||| | Sbjct 27395707 AGTGCTTGATGTCCTCCGCAATCTTGGGATCGTCGTACCTGCGCCCAATCAGGCGCTTCG 27395766 Query 7953 CATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAA 8012 |||| || |||||||| || |||||||| || |||||||| || ||||| || || | Sbjct 27395767 CATCGAACACTGTGTTCTTCGGGTTCATCGCCACCTGGTTCTTGGCGGCGTCGCCAATCA 27395826 Query 8013 GACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGTTCGATTCCCTTGGTCG 8071 |||| || || || || | || || | |||| ||||| || || || |||||| Sbjct 27395827 GACGCTC---CGACTCTGTGAATCCCACATA-GCTGGGCGTCGTCCGGTTTCCCTGGTCG 27395882 Query 8072 TTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCT 8131 || || || || || || ||| || |||| || ||||| || ||||| || || Sbjct 27395883 TTGGCGATGATCTCCACCTTTCCGTGCTGGTAGACACCCACGCAGGAGTACGTGGTGCCC 27395942 Query 8132 AAATCAATACCGATTGC 8148 || || || || || || Sbjct 27395943 AAGTCGATGCCAATAGC 27395959 Score = 196 bits (216), Expect = 6e-45 Identities = 677/1040 (65%), Gaps = 31/1040 (3%) Strand=Plus/Plus Query 7124 TTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGAT-TTATCGAT 7182 || || || ||||| ||||| || |||| ||||| || | || | | | | || || || Sbjct 17973088 TTGGGAATGCGTGTTGATCCGCCCACCAGGACGATGTCGT-CAATCTTGCTCTTGTCCAT 17973146 Query 7183 CTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACA 7242 ||| | ||| || | || || || || | || || ||||| | ||| || Sbjct 17973147 CTTGGCGTCGTTCAGGGCCTTCTCCACGGGCTGCAGGGTGTTCCGGAAGAGGTCTCCGCA 17973206 Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGA 7302 || ||||| || || ||||| | | ||| ||||| || || ||| | | | Sbjct 17973207 TAGCTCCTCGAAGCGGGCACGACTGACCTTTGTGTAGAAGTCGTGTCCCTCGAACAGGGC 17973266 Query 7303 ATCAATTTCAATGGTTGTTT--GTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360 ||| | ||| ||||||| | |||| | ||||| | ||||||||| || |||||| Sbjct 17973267 ATCCACTTCGATGGTTGCCTCAGTGCTG--GAAGACAGCGTTCGCTTGGCCCGCTCAGCT 17973324 Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTT--ACCGGAAATATCTTTCTTATGTTTAC 7418 || || || | ||| || |||||||| || || | || || | | ||||| || | Sbjct 17973325 GCGGTGCGGAGACGGCGCAGGGCACGAGGATTGGAGCGCAAGT--CCTTCTTGAACTTTC 17973382 Query 7419 GTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGT 7478 | || ||||| || | | ||| | ||||| || || || || |||||||||| Sbjct 17973383 GCTTGAACTCCTCTGCCAGGTGGTTCACCAGTCTGTTGTCAAAGTCCTCGCCACCCAAGT 17973442 Query 7479 GTGTATCCCCCGCGGTCGCTTTGACTTCAAA----GATACCTCCTTCAATGTTTAACAAC 7534 | || || || || || || || || || ||| ||| | || ||| | | | Sbjct 17973443 GAGTGTCTCCGGCAGTGGCGCGCACCTCGAACAGCGAT-CCTTCGTCGATGGTCAGAATA 17973501 Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG-TCGTCTTT 7593 || |||||||| || || |||||||| || || || || || || || || | || Sbjct 17973502 GAGACATCAAAGGTGCCGCCACCCAGATCGAAGATCAGCACATTG----CGCTCCCCCTT 17973557 Query 7594 G---TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG 7650 | ||||| || || || || || | ||| || ||||| || || || || || || | Sbjct 17973558 GAGATTCTTGTCCAGGCCATAAGCCAGAGCTGCTGCCGTCGGCTCGTTGATGATGCGCA- 17973616 Query 7651 ACA-GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAA 7709 ||| ||| ||||| || || | | | |||||||| || || || || || || ||||||| Sbjct 17973617 ACACGTTGAGGCCGGCGATGGCTCCGGCATCTTTGGTGGCCTGACGCTGGGAGTCGTTAA 17973676 Query 7710 AGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGA 7769 |||| || || || || | || ||||| ||| | || || |||| || || Sbjct 17973677 AGTACGCTGGCACTGTGATAACTGCGTCGCGCACTGAGGTGCCCAGGTACGCCTCGGCCG 17973736 Query 7770 TATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTT 7829 | || ||||| ||| || |||||||| || || || | ||||| | ||| || Sbjct 17973737 TCTCCTTCATCTTGACGAGCACCATCGAGCTGATTTCCTCCGGGGCAAAGCGCTTCACTT 17973796 Query 7830 CACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACG 7889 | || || || || || ||| | || || |||||| || || ||||| | | Sbjct 17973797 CGCCCTTGAACTCGACACTCATCTTTGGCTT-GCCGCAG--TCGTTGACCACCTTGAAGG 17973853 Query 7890 ACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCT 7949 ||| | ||||| || || || | || ||| ||||| | || || || |||| Sbjct 17973854 GCCAGTGCTTCATGTCATCCTGTATCTTCGAGTCGTCGAACTTGCGCCCAATCAGGCGCT 17973913 Query 7950 TTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGA 8009 | || || || || |||| || || ||||| || |||||||| || ||||| |||| Sbjct 17973914 TGGCGTCGAACACACTGTTCTTCGGATTCATCGCCACCTGGTTCTTGGCGGCGTCTCCGA 17973973 Query 8010 TAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGT 8069 | || || || | || || || || || || || || || || || || || | Sbjct 17973974 TGAGGCGCTCCGAA---TCGGTGAATGCCACATAACTGGGCGTTGTGCGGTTGCCCTGAT 17974030 Query 8070 CGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTC 8129 |||| || || ||||| || ||| || |||| ||||||||||| ||||| || | Sbjct 17974031 CGTTGGCGATTATTTCCACCTTTCCGTGCTGGAAGACACCGACGCACGAGTACGTGGTGC 17974090 Query 8130 CTAAATCAATACCGATTGCT 8149 | || ||||| || || ||| Sbjct 17974091 CCAAGTCAATGCCAATGGCT 17974110 Score = 168 bits (186), Expect = 8e-37 Identities = 502/767 (65%), Gaps = 18/767 (2%) Strand=Plus/Minus Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||||| ||||||| ||| ||||| || || ||||| | ||| | |||||| ||| Sbjct 21234535 CGGAACAGGTCCATATTCAGCTCCTCGAAGCGGGCACGCGAAATCTTCGAATAGAAGTCA 21234476 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTT--GTGCCGTCGAAGATAACGTTC 7343 | ||| |||| || | ||| || || | || | | |||| | || || | ||| | Sbjct 21234475 ATGCCCTCGTGCAAGGCATCTATCTCCAAGGAGGCCTCCGTGCTG--GAGGACAGCGTGC 21234418 Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT 7403 |||| || ||||| || || || || | || |||||||| ||| || || || | Sbjct 21234417 GCTTGGCCCGCTCGCAGGCAGTGCGCAGGCGGCGAAGGGCCCGCACATTGCCCTTGATGT 21234358 Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463 | ||| | || || || ||||| || |||||| | || | ||||| | Sbjct 21234357 CGGCCTTGTACTTGCGCTTGAACTCCTCCATGAAGTGGTTGACCAGACGGTTGTCGAAGT 21234298 Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGAT--ACCTC-CTT 7520 | || || |||| || || || || || || || ||||| ||||| | ||| | | | Sbjct 21234297 CCTCGCCGCCCAGATGGGTGTCGCCGGCCGTGGCCTTGACCTCAAACAGCGACCCCTCGT 21234238 Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-C 7579 | ||| | | | || || || || || || || |||| || || ||||| ||||| | Sbjct 21234237 CGATGGTCAGAATGGACACGTCGAAGGTGCCGCCGCCCAAATCGAATATGAGAACGTTGC 21234178 Query 7580 GTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTA 7639 || ||| | | ||||| || ||||||||||| | || || ||||| || || || Sbjct 21234177 GT-TCGCCCTTCAGATTCTTGTCCAGACCGTACGCCAAGGCAGCGGCCGTGGGCTCGTTG 21234119 Query 7640 ATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGC 7699 || || | || ||| || || ||||| | | |||||||| ||||| || || || Sbjct 21234118 ATTATTCTGAGCACGTTGAGACCGGCAATGGAGCCGGCATCTTTGGTCGCCTGCCGCTGG 21234059 Query 7700 GAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATAC 7759 ||||| ||||||||||| || || | ||| || ||| | || || ||| ||||| Sbjct 21234058 CTGTCGTTGAAGTAGGCCGGCACTGTGATGACGGCATCCTTCACCTTGCCACCCAGATAT 21233999 Query 7760 GATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAAC 7819 ||| || || || ||| ||||| || |||||||| ||||| || | ||||| Sbjct 21233998 AGTTCGGCAATCTCGCGCATCTTGGTCAGGACCATCGAGCTGATCTCCTCGGGGGCAAAG 21233939 Query 7820 TGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATA 7879 | || || || || || || | ||||| |||| ||| || ||| | || Sbjct 21233938 CGCTTGCGCTCGCCCTTGAACTCGATCTCAATTTTGGGCTTACCC------CCGTCGTTA 21233885 Query 7880 ---ACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 || || | | ||| | || | || || |||| || | ||| ||||| | Sbjct 21233884 ACGACTTTGAAGGGCCAGTGCTTGAGGTCCTCCTGGATCTTCTTGTCGTCGAACTTGCGG 21233825 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGC 7983 || || || || || ||||| || || || || |||| ||||||||| Sbjct 21233824 CCAATCAGTCGTTTCGCATCGAAGACCGTATTCTTGGCGTTCATGGC 21233778 >seq1 Length=22123056 Score = 145 bits (160), Expect = 1e-29 Identities = 247/355 (70%), Gaps = 5/355 (1%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || || || ||||| || || || || ||| || || || || | || Sbjct 7408067 ATCGAAGTCCTCGCCTCCCAAATGAGTGTCGCCGTTGGTGGCCACCACCTCGAACACGCC 7408008 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || ||| | | || || ||||| || ||||| || ||||| || || | || || Sbjct 7408007 GTTATCGATGGTCAGCAGGGAGACATCGAAGGTACCGCCGCCCAGATCGAACACCAGCAC 7407948 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 |||| | ||| | || | || ||| |||||||| || || ||||| || || ||||| Sbjct 7407947 GTTCTTCTCGCCCTCCCTTTT---ATCCAGACCGTAGGCAATGGCCGCAGCAGTCGGTTC 7407891 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTC 7694 || ||||| || | | || || || ||||| | ||| ||||| || || ||||| | Sbjct 7407890 GTTGATAATGCGCATAACATTGAGACCGGCAAT-GACGCCAGCATCCTTGGTGGCTTGAC 7407832 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | || | |||||| ||||||||||| || || || || |||| ||||| ||||| || | Sbjct 7407831 GCTGGGCATCGTTGAAGTAGGCCGGCACTGTGACCACGGCGTGGGTGACCTTCTTGCCCA 7407772 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 |||| | ||| ||| | || ||||| ||| || ||||| | || ||||| || Sbjct 7407771 GATAAGCTTCGGCGGTTTCCTTCATCTTGCCGAGGACCATGGCAGAGATCTCCTC 7407717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132752365040