Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20miranda_20[refseq_20GCF_5F000269505.1_202013-04-19]
6 sequences; 136,728,780 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq5 107 2e-18
seq4 105 8e-18
>seq5
Length=28826359
Score = 107 bits (118), Expect = 2e-18
Identities = 181/262 (69%), Gaps = 0/262 (0%)
Strand=Plus/Plus
Query 176021 TCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTG 176080
||||| || ||| | || || |||||||||||||| | |||||| || | ||||| |||
Sbjct 597189 TCCTTGCCGCCCGTCAGCCGAGTACCAAACTGACCGCGCGGCTCCAGCAAGTTGATGTTG 597248
Query 176081 TTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACCG 176140
|| ||||| | ||||| | |||| || || || || | ||| ||||| || |||
Sbjct 597249 TTCGAACCAACGTAGTTCTGGGCCAGATTCACGATGGTCATCTGGAGGGAGACCTCGCCG 597308
Query 176141 TGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCATCC 176200
|||||||| || | |||| || || | | | || ||| ||||| |||| ||| |
Sbjct 597309 TGGTGGTAGGCCGACATCTCCGCCACGGAGCCAGACAGCTGGGCCACCTTCACCTCGCGC 597368
Query 176201 TTGAGATTCTTGTGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCATCC 176260
||| || | ||| || | | |||| |||||||| || ||||| || ||||||
Sbjct 597369 TTGTCGTTGCGCTTGAAGCAAGTGAACATGACCTTGCGCTGGCCGGGCTTCAGGCCATCC 597428
Query 176261 GCCATGTGTGCGATAGAACGCT 176282
||| | | ||| || ||||
Sbjct 597429 ACCAGGCTGGGGATGGAGCGCT 597450
>seq4
Length=20862834
Score = 105 bits (116), Expect = 8e-18
Identities = 121/163 (74%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 102173 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 102232
|||||| ||||| | | || |||||| || || || |||||||| || |||
Sbjct 15862900 CTTTGCCGAGCGTATTATTGCCTTTGCGGCCGTGGAAGGAATCTTCTTTAGCGGCAGCTT 15862841
Query 102233 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292
| | || | |||||| |||||||| ||||||||||| ||||| ||||||||||||
Sbjct 15862840 TGCCTCGATCTTTTGGCTGAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGA 15862781
Query 102293 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTG 102335
||| ||||| |||||||| || || ||| || |||||||||
Sbjct 15862780 GCTGATCTCCCGTGACGAAGGTCTTCACTGCGACTTTGCGGTG 15862738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742353444320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |