Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20miranda_20[refseq_20GCF_5F000269505.1_202013-04-19]
6 sequences; 136,728,780 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq5 91.5 1e-13
>seq5
Length=28826359
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || |||||||| || ||||||| || ||||| || || ||||||||
Sbjct 15756117 ATGCAGATCTTTGTAAAGACCCTAACGGGCAAGACCATAACTCTTGAGGTCGAACCTTCG 15756058
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || |||| || ||| |||||||| ||| | || |||||||
Sbjct 15756057 GATACCATCGAAAATGTCAAAGCCAAGATCCAGGACAAAGAAGGAATTCCTCCAGATCAA 15755998
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
||| | | ||||| || ||||| |||||||||||| ||| || | |||||||||
Sbjct 15755997 CAGCGTTTGATCTTCGCTGGCAAGCAATTGGAAGATGGCCGAACACTGTCTGATTATAAC 15755938
Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756
||||| || || || || ||||
Sbjct 15755937 ATTCAGAAGGAGTCCACCTTGCA 15755915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425404768892274
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |