Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20miranda_20[refseq_20GCF_5F000269505.1_202013-04-19] 6 sequences; 136,728,780 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq3 82.4 9e-11 >seq3 Length=33007066 Score = 82.4 bits (90), Expect = 9e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 139294 CAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTC 139353 |||||||||| || ||||| || || |||||||||||||| ||||| || ||||| | | Sbjct 25125106 CAGACATATTGGCCAGCAGCGCCTGAGCTGTGCAGATGTTGCTGGTGGCCTTGTCCCGCC 25125047 Query 139354 TAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC 139411 || ||||| || || || || ||||| || | ||| ||| ||||| || |||| Sbjct 25125046 GGATGTGCTGTTCCCTCGTCTGCAGTGCCAAGCGGTAGGCATCGTTGCCGTCCATGTC 25124989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998356575120