Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20miranda_20[refseq_20GCF_5F000269505.1_202013-04-19] 6 sequences; 136,728,780 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 2e-13 >seq4 Length=20862834 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 65070 CTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATT 65129 ||| |||||||| || |||| |||||| ||||| || |||||||| ||| || Sbjct 15862900 CTTTGCCGAGCGTATTATTGCCTTTGCGGCCGTGGAAGGAATCTTCTTTAGCGGCAGCTT 15862841 Query 65130 CTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGA 65189 | | || | |||| |||||||||| ||||||||||| || || |||||| || || Sbjct 15862840 TGCCTCGATCTTTTGGCTGAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCCAACGA 15862781 Query 65190 ACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTG 65232 || || ||||| || || ||||| ||| || ||||| ||| Sbjct 15862780 GCTGATCTCCCGTGACGAAGGTCTTCACTGCGACTTTGCGGTG 15862738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569555257280