Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20miranda_20[refseq_20GCF_5F000269505.1_202013-04-19] 6 sequences; 136,728,780 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 5e-12 >seq5 Length=28826359 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 ||||||||||| || || |||||| | || ||||| ||||| ||| | || ||||| Sbjct 28457682 AAAATGCAAATCTTCGTGAAAACTCTCACTGGCAAGACCATCACCTTGGAGGTCGAGCCC 28457623 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || || ||| | || || ||||| ||||| || ||| | ||| ||| Sbjct 28457622 TCTGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAGAT 28457563 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || | || || | || ||||| ||||||||||||| | | || || | || ||| Sbjct 28457562 CAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTAC 28457503 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || || || || || ||||| ||||| | | ||||| || || Sbjct 28457502 AACATCCAGAAGGAGTCGACCCTGCACTTGGTGCTCCGCCTGCGCGGTGG 28457453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841569810958