Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20miranda_20[refseq_20GCF_5F000269505.1_202013-04-19]
6 sequences; 136,728,780 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq1 105 5e-18
>seq1
Length=22123056
Score = 105 bits (116), Expect = 5e-18
Identities = 165/234 (71%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|||||||| ||||| |||||||| || ||||| || || || | || || || |
Sbjct 6630352 AAAATGCAGATTTTCGTGAAAACCCTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCC 6630411
Query 27847 ACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
| ||| || | ||| ||||| || || ||||| || || |||| |
Sbjct 6630412 TCGGACACCATCGAGAAT--GTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCAG 6630469
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| ||||| || || || || ||||| || || |||| |||| ||| | |||||||| |
Sbjct 6630470 ATCAGCAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACTTTGTCCGACT 6630529
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGCG 28018
|||||||||| || ||| ||||||||| ||||| |||||| | ||||||||||
Sbjct 6630530 ACAACATCCAGAAGGAGTCCACTTTGCACTTGGTATTGCGTCTTCGTGGCGGCG 6630583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355862373977562
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |