Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20miranda_20[refseq_20GCF_5F000269505.1_202013-04-19]
6 sequences; 136,728,780 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq5 677 0.0
>seq5
Length=28826359
Score = 677 bits (750), Expect = 0.0
Identities = 1272/1852 (69%), Gaps = 31/1852 (2%)
Strand=Plus/Minus
Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 75457
|| |||||||| |||| ||||||||| || |||||||| || |||| | | |||
Sbjct 15308231 GCAGGTTTTGTGCGTAAATAGTACATTCCGGTTTTTAGTCCAGCTTTCCAGGAGAAAAAA 15308172
Query 75458 TGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTT 75517
|| ||| ||| | ||| || | || || |||| |||| ||| | ||||||||||
Sbjct 15308171 TGTATGGATGTCAATTTTCCGTAGTTGGGCTCTGCTACGTGAACATTAAACGACTGACTT 15308112
Query 75518 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCC 75577
||||| || || || ||||||||||| |||||||| || ||| ||| | |||||||
Sbjct 15308111 TGATCAATAAATGCACCTCTATCAGCAGCCATTTTAATTGTGGATTTTACTGAAATTTCC 15308052
Query 75578 CAAATAGTTTTGAAAACTTGTTTGATATCATCT---GGAAGATTTG---TATTTTGAATG 75631
|| | |||||| ||| | | | | | | | |||| | || ||| |||||||
Sbjct 15308051 CATACAGTTTTATAAA---GATCGCGAACCTTTTGGGGAATAGTTTCAATATCTTGAATG 15307995
Query 75632 GATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTT 75691
|| || | || || ||| |||| || |||||||||| ||| || | ||| |||
Sbjct 15307994 GAGCCCCTGCTGGAAATTATTTTATTTTTCATCTCATCATCCCATAAGTCCAACTCTGTT 15307935
Query 75692 AAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTG 75751
||| | || | | |||| |||| || | ||||||||| ||||| ||||||| || ||
Sbjct 15307934 AAATCCCTCAATAAATGATGATTGACCACTTGAAATTCACCAGATAATACTCGTCTCGTA 15307875
Query 75752 TAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAA 75811
|||||||| ||||||||||||| | ||||| || || |||| |||||| ||||| ||
Sbjct 15307874 TAAATATTTGTGGTATATGGTTCGAATGATTCGTTATTACCCATAATTTGTGCAGTAGAT 15307815
Query 75812 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCT 75871
|| || ||||| || || || || || ||| || | || || || | || | |||
Sbjct 15307814 GCTGTAGGCATCGGCGCTACTAACAACGAATTCCTAATTCCGTGCTTTTTAATGTCTTCT 15307755
Query 75872 TTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGA 75931
|| || || ||||||||| || | | ||| |||||| | ||| |||||||||
Sbjct 15307754 TTCAGGCTTTGCCAATCCCATAGGTTCGTTGGAGTTTTATCCCACATATCATATTGTAGA 15307695
Query 75932 ATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGT 75991
||||| ||||| || ||| | ||| ||||| || | || || ||| |||
Sbjct 15307694 ATTCCTTTGCTTACAGGACTTCCTTCATAGGTTTCATATGGACCAAATGCTTGAGCAAGT 15307635
Query 75992 TCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTT--ATTAAGAT 76049
|| ||||| || |||| || || ||||||||||||| || || || || |||| |
Sbjct 15307634 TCACAACTAGCTTCTAGAGCTCCAAAATAAATTGTTTCAAATAT-TTGTTGGTTTAAAAG 15307576
Query 76050 CTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCT 76109
| ||||| || ||| | ||| || | | | ||| || || || ||||| || |
Sbjct 15307575 ACCG-GCTTCTTCGCTTTCATAGGGAAAACGCATTAAAATTAAAGCGTCAGCTAGACCTT 15307517
Query 76110 GAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGT 76169
||| || ||||| || || | ||| || |||||| | | |||||||| | |||||
Sbjct 15307516 GAATACCTATACCGATTGGACGATGCCTTAAATTGGACTTCTTGGCTTCTGGCAAAGGGT 15307457
Query 76170 AATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTA 76229
|||| || || ||||||||||| || |||||| || |||| ||| || || ||||
Sbjct 15307456 AATAGTTGATGTCTATAATTTTGTTAAGATTTTTGGCAACAGTTTTGGTTACTTCTTTTA 15307397
Query 76230 GTTTGAGAAAATCAAA---TTTTCCATCTATCACAAACATATTAAGAGCTATAGATGCTA 76286
||| |||||| | |||| | || | || ||||| || || ||||| || ||||
Sbjct 15307396 ATTTTTTGAAATCATACGTTTTTTCTGCTGTTACGAACATGTTCAGTGCTATTGAAGCTA 15307337
Query 76287 GATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTAC 76346
||| || || || | ||||| || | || | | || || || |||| |||||
Sbjct 15307336 AATTGCAGACAGCGATCTCATCAGGTGCTGAGTACTCGACAATTTCTGTACATAAATTAC 15307277
Query 76347 TACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAA 76406
| || || ||||| |||| ||||||||| ||||||||| | || || || |||||| |||
Sbjct 15307276 TGCATTTAATAGTGCCAACATTTTGTTGATTGCTCTTTCTATTGCAGGAATCCTTAAAAA 15307217
Query 76407 GAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG 76466
| | | || | |||||||| | || ||||| ||||| | ||| | | |
Sbjct 15307216 GCATGTATGGGTTACCAGTTTCCACTTGCGATTCTATAATGGCAAACCATAAAGCCTGGG 15307157
Query 76467 CTTTTA-TTATAGATTTGTA--TCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAA 76523
||| | | | |||| | | || ||||| | ||||||| ||| | |||||
Sbjct 15307156 CTTCCACTGTTCGATTCGCACGTC-CTTCTTGC--TCATATTTGACATAGAGTTCTTCAA 15307100
Query 76524 ATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACT 76583
||| || ||||||||||| | | |||||||||| || |||||||||||||||||
Sbjct 15307099 ATTTTTCGCCCCAAACATCTTGAAGGCCAGGACATTTATGTGGACACATCAATGACCAGC 15307040
Query 76584 CACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGAT 76643
||| | ||| ||| |||||||| || |||||||| ||||||| ||| ||| ||||
Sbjct 15307039 TTTCATTTGCCTCAACACGTTTCATGAAAAGATCAGGAATCCATAAAGCGTAAAAAAGAT 15306980
Query 76644 CTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATAT 76703
| || | || |||||| ||||| || || |||| || |||| ||||| | || ||
Sbjct 15306979 CACGTGCTCGGTTTTCTTCTTTTCCAGTGTTTCTTTTGAGGTCTAAAAACTCAAAAACAT 15306920
Query 76704 CAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGAT 76763
| |||||||| || |||| ||| || || | |||| |||| ||| |||||||||||
Sbjct 15306919 CTGAATGCCAGGGCTCTAAATAAATAGCAAAGGCACCAGGTCTTTTTCCACCTCCCTGAT 15306860
Query 76764 CTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAA-TAATGCCGTTAGATGTA 76822
| | ||||| || |||||| ||||||| |||||||||| |||| || || || |||
Sbjct 15306859 CAACATATCGAGCCACATTATTAAAAACTCTTAACATTGGAACTAAT-CCATTCGACGTA 15306801
Query 76823 CCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATT 76882
|| || |||||| | || || | || |||||||| | || | ||| || |||
Sbjct 15306800 CCGTTCGTTCCACATATTGAAGTGCCTTTAGCACGAATGCAATGAACA-TTAGTCCGATT 15306742
Query 76883 CCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATA 76942
|| ||||| ||| || || || ||||| ||| | || | | | || || || ||
Sbjct 15306741 CCACCTGCTGATTTGGAAATCAGTGCACATTGTTCAACTGATTTAAAAATACCTTCAATT 15306682
Query 76943 CTATC---ATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999
||| || ||| ||| || ||||||||| |||| |||| | || || |
Sbjct 15306681 GAATCCGAATTCAT--TGTCAA-AAGAAAACACGAGGACAATTGAGGTCGATTTGTAGCA 15306625
Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059
||| ||| | || || || ||||| || || || |||||| ||||| ||||| |||
Sbjct 15306624 GCAGCAAAAAGCGTTGGCGAGGCATGCGTAAAGTATCGTTCAGACAGTAGGTTGTAAGTT 15306565
Query 77060 TCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGC 77119
|| | | || || ||||| | |||||| || | |||||| ||||||| ||| ||
Sbjct 15306564 TCCACTGCCGCATCAATATCGTCTCCATGAATACCAAGAGCGACGCGCATCAGCATGTGT 15306505
Query 77120 TGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTA 77179
|| || |||||| || | || |||||| || | | || || || | || |||
Sbjct 15306504 TGTGGACGTTCTGCAATTTTCCCATTTATCTTAAGTAGATAGGAACGCTCGAGCGTCTTA 15306445
Query 77180 AAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTA 77231
|| ||||||||||| || ||| |||| || ||||||||| | || ||||
Sbjct 15306444 AATCCAAAATAGTTATAACCAAAATCTCGGTCATAAATAATAGCAGAGTTTA 15306393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712934346529920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |