Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6840 138 1e-27 >seq6840 Length=32352404 Score = 138 bits (152), Expect = 1e-27 Identities = 188/263 (71%), Gaps = 6/263 (2%) Strand=Plus/Plus Query 145683 CAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCC 145742 |||||| | ||| || ||| |||||||| || || ||||| |||| || || || Sbjct 15164143 CAGGGGATTCACATGATTGTTATAGACGTGAGCATCGCCCAGCGTATGGACAAAATCGCC 15164202 Query 145743 GGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTT 145802 ||||| | |||||| | ||||||| ||||||||||| || || || ||| ||||| Sbjct 15164203 GGGCTTCAAGCCCGTCACATGGGCGATCATGTAGGTCAACAAGGCATACGAGGCGATGTT 15164262 Query 145803 GAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCC 145862 ||| ||||| ||||| |||||||| | |||||| ||||| |||||||| | || || Sbjct 15164263 GAAAGGCACTCCCAGACCCATGTCGGCGCTGCGCTGATACAGTTGGCAGGACAATTCACC 15164322 Query 145863 GCCCGCC------ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGG 145916 | || | || |||||||| |||| |||||| ||||||| ||||| ||| Sbjct 15164323 ACGCGACTGCGAAACATAGAACTGCGCCAGGCAGTGGCACGGCGGCAACGCCATTTGGGG 15164382 Query 145917 CAGGTCCGCCGGGTTCCAGGCGG 145939 | |||| || ||||| |||| Sbjct 15164383 TATGTCCAAAGGATTCCATGCGG 15164405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590026341057640