Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq6838 93.3 3e-14 >seq6838 Length=24764193 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | || || |||| ||||||||||| ||| || ||| || | Sbjct 2124492 ATGCAAATCTTCGTGAAGACCCTGACTGGCAAAACCATCACCTTGGAGGTGGAGCCATCC 2124551 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| |||||| || || |||||| | ||| |||||| Sbjct 2124552 GATACCATTGAGAATGTGAAGGCTAAAATTCAGGACAAGGAAGGTATTCCCCCAGATCAG 2124611 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | || ||||| || ||||| ||| |||||||| | || || | |||||||| Sbjct 2124612 CAGCGTCTGATCTTCGCTGGCAAGCAACTGGAAGATGGCCGCACCTTGTCTGATTACAAC 2124671 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGT 25243 || || |||||||| || |||||| |||| Sbjct 2124672 ATCCAGAAGGAATCGACCCTTCACTTGGT 2124700 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | || || |||| ||||||||||| ||| || ||| || | Sbjct 2124264 ATGCAAATCTTCGTGAAGACCCTGACTGGCAAAACCATCACCTTGGAGGTGGAGCCATCC 2124323 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| || ||| || || |||||| | ||| |||||| Sbjct 2124324 GATACCATTGAGAATGTGAAGGCTAAGATTCAGGACAAGGAAGGTATTCCCCCAGATCAG 2124383 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | || ||||| || ||||| ||| |||||||| | || || | |||||||| Sbjct 2124384 CAGCGTCTGATCTTCGCCGGCAAGCAACTGGAAGATGGCCGCACCTTGTCTGATTACAAC 2124443 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGT 25243 ||||| |||||||| || || ||| |||| Sbjct 2124444 ATTCAGAAGGAATCGACCCTCCACTTGGT 2124472 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | || || |||| ||||||||||| ||| || ||| || | Sbjct 2122668 ATGCAAATCTTCGTGAAGACCCTGACTGGCAAAACCATCACCTTGGAGGTGGAGCCATCC 2122727 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| || ||| || || |||||| | ||| ||| ||| Sbjct 2122728 GATACCATTGAGAATGTGAAGGCTAAGATTCAGGACAAGGAAGGTATTCCCCCAGACCAA 2122787 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | |||||||| || ||||| ||| |||||||| || || | || |||||| Sbjct 2122788 CAGCGTCTTATCTTCGCCGGCAAGCAACTGGAAGATGGTCGCACCTTGTCTGACTACAAT 2122847 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGT 25243 || || |||||||| || ||||| |||| Sbjct 2122848 ATCCAGAAGGAATCGACCCTTCATCTGGT 2122876 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | || || |||| ||||||||||| ||| || ||| || | Sbjct 2123124 ATGCAAATCTTCGTGAAGACCCTGACTGGCAAAACCATCACCTTGGAGGTGGAGCCATCC 2123183 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| |||||| || || |||||| | ||| ||| || Sbjct 2123184 GATACCATTGAGAATGTGAAGGCTAAAATTCAGGACAAGGAAGGTATTCCCCCAGACCAG 2123243 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | || ||||| || ||||| ||| |||||||| || || | |||||||| Sbjct 2123244 CAGCGTCTGATCTTCGCCGGCAAGCAACTGGAAGATGGTCGCACCTTGTCTGATTACAAC 2123303 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGT 25243 ||||| |||||||| || ||||| |||| Sbjct 2123304 ATTCAGAAGGAATCGACCCTTCATCTGGT 2123332 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | || || |||| ||||||||||| || || ||| || || Sbjct 2123352 ATGCAAATCTTCGTGAAGACCCTGACTGGCAAAACCATCACTCTGGAGGTGGAGCCATCA 2123411 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| || ||| ||||| |||||| | ||| |||||| Sbjct 2123412 GATACCATTGAGAATGTGAAGGCTAAGATTCAGGATAAGGAAGGTATTCCCCCAGATCAG 2123471 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | || ||||| || ||||| ||| |||||||| || || | || |||||| Sbjct 2123472 CAGCGTCTGATCTTCGCCGGCAAGCAACTGGAAGATGGTCGCACCTTGTCTGACTACAAT 2123531 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGT 25243 || || |||||||| || ||||| |||| Sbjct 2123532 ATCCAGAAGGAATCGACCCTTCATCTGGT 2123560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410762549945174