Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq6839 138 2e-27 >seq6839 Length=26866924 Score = 138 bits (152), Expect = 2e-27 Identities = 192/264 (73%), Gaps = 4/264 (2%) Strand=Plus/Plus Query 189448 TCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACG 189507 ||| |||||| || | || ||||| |||| | ||||| |||||||| | ||| | || Sbjct 677456 TCTGTGGAACTCGGCCCAGCTGCAGCTGGTCAAGGAAGGCAAAATGCACGGGTTTCTGCG 677515 Query 189508 AATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGC-TTTGAGTT 189566 ||||||||||| || ||||| | || ||||| ||| || ||| | || ||||| | Sbjct 677516 CATGTATTGGGCCAAAAAGATTTTAGAGTGGACCGAAACGCCGGAACAAGCGCTTGAG-T 677574 Query 189567 ATAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACG-GATCCTAACGGATACGTA 189625 |||| || | |||||| |||||||| || || || ||| ||||| || || ||||| Sbjct 677575 ATAGCATATTATTGAACGACAAGTACAGTCTGGATGG-ACGCGATCCGAATGGCTACGTT 677633 Query 189626 GGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATATTT 189685 ||||| |||||||| || | || | ||||| || ||||| || | |||||||| Sbjct 677634 GGTTGCATGTGGTCCATCGGTGGGATTCACGACCAAGGCTGGAAGGAGCGCGCGATATTT 677693 Query 189686 GGAAAGATAAGATATATGAATTAT 189709 || ||||| | |||||||| ||| Sbjct 677694 GGTAAGATTCGCTATATGAACTAT 677717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923117855133640