Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq6840 96.9 3e-15 >seq6840 Length=32352404 Score = 96.9 bits (106), Expect = 3e-15 Identities = 298/457 (65%), Gaps = 8/457 (2%) Strand=Plus/Plus Query 20135 GGAAAGGGACGTGGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAG 20194 || ||||||||||| || ||| |||| | | || || | | ||| | || ||| Sbjct 15164108 GGGAAGGGACGTGGTTCACGTTTCATCTGCTCCAGCAGGGGATTCACATGATTGTTATAG 15164167 Query 20195 ATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCA 20254 | ||| ||||| |||| ||| || | ||| || ||||| | | || || ||||| || Sbjct 15164168 ACGTGAGCATCGCCCAGCGTATGGACAAAATCGCCGGGCTTCAAGCCCGTCACATGGGCG 15164227 Query 20255 AGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCT 20314 | ||| || || || | || ||| ||| ||||| ||||| ||||||| ||||||||| Sbjct 15164228 ATCATGTAGGTCAACAAGGCATACGAGGCGATGTTGAAAGGCACTCCCAGACCCATGTCG 15164287 Query 20315 CCCGACCTCTGATACAGCTGACAGGAAAGCTCAC----CGTCAGC--TACATAAAATTGA 20368 | | ||||||||| || ||||| | |||| || | || ||||| || || Sbjct 15164288 GCGCTGCGCTGATACAGTTGGCAGGACAATTCACCACGCGACTGCGAAACATAGAACTGC 15164347 Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACAC 20428 | |||| || ||||| | |||||| | | |||| || ||||| || || Sbjct 15164348 GCCAGGCAGTGGCACGGCGGCAACGCCATTTGGGGTATGTCCAAAGGATTCCATGCGGAC 15164407 Query 20429 ATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGG 20488 || ||||| | | ||| ||||| || ||| ||| | | | || || Sbjct 15164408 ATTATGATGCGACGATCCGCCGGATCGTTGCGTATAGTATCGATGACCTGTTTCAGCTGA 15164467 Query 20489 TCAAACCCCTGGCCTGTATAGTCAGC-ATCCGCGTCCACGTACGCCGCCCCAAAGTGCCT 20547 |||| |||||||| || ||||| | | | | | | || || |||||||| | Sbjct 15164468 TCAATACCCTGGCCGGTGTAGTCGTCGGTGCATTTAC-CATATTTTGCGCCAAAGTGACG 15164526 Query 20548 CCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCC 20584 ||||||||| || || || || |||| ||| ||| || Sbjct 15164527 CCACTGGAAGCCATATACTGGACCCAGATCACCCACC 15164563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441335057108440