Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq6839 87.8 1e-12 >seq6839 Length=26866924 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 69531 AATGGTTATGTGTTTTTCTTTTACCGAGAAGTGGCCGTCGAGCATATTAACTGCGGAAAG 69590 || || | |||| | ||||| | ||| ||| || || | ||| | || |||| || ||| Sbjct 16474326 AACGGCTTTGTGCTGTTCTTCTTCCGTGAACTGTCCATGGAGTACATGAACTTTGGCAAG 16474267 Query 69591 ACCATTTATTCGAGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGCCC--ACA-TCGG 69647 | | ||||| | || | ||| |||||||| || |||| ||| || || ||| || Sbjct 16474266 GCGGTCTATTCCCGGGTGGGTCGCGTCTGCAAGAACGATCGCGGTGGACCCTACAATC-- 16474209 Query 69648 TACTCGGATAAATGGACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAA 69707 | | | | ||||||||||| || || || ||||| || || |||||||| ||||| Sbjct 16474208 -ATGCCAAGAGCTGGACGTCATTCTTGAAAACACGACTCAACTGCTCGGTGCCTGGCGAG 16474150 Query 69708 TTCCCCTTTTACTTTGACGA 69727 || || || |||||||| || Sbjct 16474149 TTTCCATTCTACTTTGATGA 16474130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408209162850776