Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq6840 91.5 2e-13 >seq6840 Length=32352404 Score = 91.5 bits (100), Expect = 2e-13 Identities = 200/300 (67%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 48075 ACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTT 48134 |||||| || |||||||| ||||| ||||| || ||||||| ||||| ||||| Sbjct 1635280 ACCATAGGGCGAACGTGGGTAGAACGGTGTCTGTTCATTCTGTGGCGTCTCCACAACCTT 1635221 Query 48135 ACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAA 48194 || || || || ||||| ||||| |||| ||||||| | | ||||| || Sbjct 1635220 GCCGTACAGCTCTGACGTGGACGCTTGGTAGAAACGAACCGTTTTCTCCATTCCACATGT 1635161 Query 48195 ACGGACTGCCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGG 48254 || | ||| || || | | ||| ||||| | ||||| || | ||||| ||| Sbjct 1635160 CCGTATTGCATCCAGTATGCGCAGTGTGCCAACTGCATCCACCTCTGCCGTATATTCGCT 1635101 Query 48255 CATCTCAAACGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTCATCTGGTTG 48314 || || || || || || ||||| |||||| | |||||||||||||| ||||| Sbjct 1635100 CAAATCGAAAGAGACTTTCACATGCGACTGTGCAGCCAGATTATAAATCTCCGTTGGTTT 1635041 Query 48315 AACCTGCTGAATAACCCTCACTAAATTTGTAGAGTCTGTTAAGTCTCCATAATGCAATTT 48374 ||| | ||| | | |||| | | | ||| || | || |||||||||| ||| Sbjct 1635040 CACCATATTAATGATCTTCACCAGGCTGCTGCTGTCCGTCATATCGCCATAATGCAGTTT 1634981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665437491910120