Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_022613.1 Length=43686 Score E Sequences producing significant alignments: (Bits) Value seq6840 89.7 1e-13 >seq6840 Length=32352404 Score = 89.7 bits (98), Expect = 1e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 906 GAGCTGCCGGCTATGATCTGTTCAGTGCCTACGATATTACTGTTCCGGCACATGGTAGAG 965 |||||||||||||||| | ||| || |||||| || || || || | ||| | || Sbjct 675190 GAGCTGCCGGCTATGACTTACGCAGCGCTTACGATGTTGTGGTGCCAGCGCGTGGCAAAG 675131 Query 966 CGGTGGTGCCTACCGATTTGATGTTACACTTTCCGGAGGGTTGTTACGGTCGCATCGCGC 1025 | ||||| || ||| || | | || | ||||| || | |||||||||| | || | Sbjct 675130 CTGTGGTCAAAACGGATCTGCAGGTGCAGGTGCCGGAAGGCTCTTACGGTCGCGTAGCAC 675071 Query 1026 CGCGCTCGGGATTAGCGACTAAGTTCTTTATCGATGTTGGCGCAGGAGTTATAGATCCGG 1085 |||| || || | || ||| |||||||||||| ||||| || ||| | || || Sbjct 675070 CGCGTTCCGGGCTGGCCGTAAAGAACTTTATCGATGTGGGCGCCGGTGTTGTGGACGAGG 675011 Query 1086 ATTACCGGGGAAACGTTAGCGTTGTACTGTTTAA 1119 |||| || ||||| | | ||||| || || || Sbjct 675010 ATTATCGCGGAAATTTAGGTGTTGTCCTCTTCAA 674977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139662253353216