Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq6840 138 9e-28 seq6838 134 1e-26 seq5292 134 1e-26 seq6836 109 4e-19 >seq6840 Length=32352404 Score = 138 bits (152), Expect = 9e-28 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || |||||||| || | || || |||||||| ||||| || || | || |||||| | Sbjct 15336131 CGGAGCACCAAGTGCAAGGTTGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTGCGACCA 15336190 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | ||| ||||||||| | || | | |||||||| || ||||| || |||||| Sbjct 15336191 TCTTCCAATTGCTTGCCAGCAAAGATTAGACGCTGCTGATCTGGAGGAATTCCTTCTTTG 15336250 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || ||||||| | || | || || || |||| || |||||||| || Sbjct 15336251 TCCTGGATCTTGGCTTTGACATTCTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATG 15336310 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || |||| |||||||||||| ||||||||| Sbjct 15336311 GTCTTACCCGTTAGGGTTTTAACAAAGATCTGCATT 15336346 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| |||||||| || | ||||| || || |||||||| || || | Sbjct 311369 CCACCACGCAGACGGAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTGTAGTCGGAC 311310 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || ||||| || | ||||| | |||||||| || || Sbjct 311309 AGAGTGCGTCCATCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGTGGG 311250 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||||||||| || | || |||||| | || | |||||||| | || || Sbjct 311249 ATTCCCTCTTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGACC 311190 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | || || || ||||| || | |||||||| || || |||||||| Sbjct 311189 TCCAAGGTAATGGTCTTGCCGGTGAGAGTTTTAACGAAGATTTGCATTTT 311140 >seq6838 Length=24764193 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| ||||||||||| || || || ||||||||||| || || | Sbjct 2125174 CCGCCACGCAGACGCAGTACCAAATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGAC 2125115 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || ||||| ||||| ||| | |||| | |||||||| || ||| Sbjct 2125114 AGGGTGCGACCATCTTCCAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGGGGA 2125055 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || ||||| || ||| || | || ||| | || | || || ||| | || || Sbjct 2125054 ATACCTTCCTTGTCCTG-AATCTTAGCCTTCACATTCTCAATGGTATCGGAAGGCTCCAC 2124996 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || |||||||| | ||| || || || || ||||| Sbjct 2124995 CTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 2124948 Score = 125 bits (138), Expect = 6e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || ||||||||||| || ||||| || || || || || || | Sbjct 2122438 CCACCACGCAGACGGAGGACCAAATGAAGGGTCGATTCCTTCTGGATATTGTAGTCAGAC 2122379 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || ||||| ||||| || | |||| | |||||||| || ||| Sbjct 2122378 AAGGTGCGACCATCTTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGA 2122319 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || ||||| || ||| || | || ||| | || | || || ||| | || || Sbjct 2122318 ATACCTTCCTTGTCCTG-AATCTTAGCCTTCACATTCTCAATGGTATCGGAAGGCTCAAC 2122260 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| || || || || || || |||||||| || ||||||||||| Sbjct 2122259 CTCCAGAGTGATGGTCTTTCCCGTCAAAGTTTTAACGAAGATCTGCATTTT 2122209 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || |||| |||||| || ||||| || |||||||| ||||| | Sbjct 2123350 CCACCACGCAGACGGAGGACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAATCAGAC 2123291 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || ||||| ||||| || | |||| | ||||| || || ||| Sbjct 2123290 AAGGTGCGACCATCTTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGA 2123231 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || ||||| || |||||| | || ||| | || | || || || | || || Sbjct 2123230 ATACCTTCCTTGTCCTG-AATTTTAGCCTTCACATTCTCAATGGTATCGGATGGCTCCAC 2123172 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||||||||| | ||| || || || || ||||| Sbjct 2123171 CTCCAAGGTGATGGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 2123124 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| ||||| || ||||| || || ||||| ||||| | | |||||| Sbjct 2124707 ACGGAGAACCAAGTGAAGGGTCGATTCCTTCTGGATGTTGTAATCAGACAAGGTGCGGCC 2124648 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| |||||||| | |||| | |||||||| || |||||||| || || Sbjct 2124647 ATCTTCCAGTTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGGGGAATACCTTCCTT 2124588 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || |||||| | || ||| | || | || || || | || || || | || | Sbjct 2124587 GTCCTG-AATTTTAGCCTTCACATTCTCAATGGTATCGGATGGCTCCACCTCCAAGGTGA 2124529 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||||||||| | ||| || || || || ||||| Sbjct 2124528 TGGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 2124492 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || |||| |||||| || ||||| || || || || || || | Sbjct 2123578 CCACCACGCAGACGGAGGACCAGATGAAGGGTCGATTCCTTCTGGATATTGTAGTCAGAC 2123519 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || ||||| ||||| || | |||| | |||||||| || ||| Sbjct 2123518 AAGGTGCGACCATCTTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGA 2123459 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || || || || ||| || | || ||| | || | || || || | || || Sbjct 2123458 ATACCTTCCTTATCCTG-AATCTTAGCCTTCACATTCTCAATGGTATCTGATGGCTCCAC 2123400 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || ||||||||||| | ||| || || || || ||||| Sbjct 2123399 CTCCAGAGTGATGGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 2123352 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || ||||| || || || ||||| || |||||||| ||||| | Sbjct 2124490 CCACCACGCAGACGGAGAACCAAGTGGAGGGTCGATTCCTTCTGAATGTTGTAATCAGAC 2124431 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || ||||| ||||| || | |||| | |||||||| || ||| Sbjct 2124430 AAGGTGCGGCCATCTTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGA 2124371 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || ||||| || ||| || | || ||| | || | || || || | || || Sbjct 2124370 ATACCTTCCTTGTCCTG-AATCTTAGCCTTCACATTCTCAATGGTATCGGATGGCTCCAC 2124312 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||||||||| | ||| || || || || ||||| Sbjct 2124311 CTCCAAGGTGATGGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 2124264 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || |||| |||||| || ||||| || || || || || || | Sbjct 2122894 CCACCACGCAGACGGAGGACCAGATGAAGGGTCGATTCCTTCTGGATATTGTAGTCAGAC 2122835 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || ||||| ||||| || | || | | || || || || ||| Sbjct 2122834 AAGGTGCGACCATCTTCCAGTTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCTGGGGGA 2122775 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || ||||| || ||| || | || ||| | || | || || || | || || Sbjct 2122774 ATACCTTCCTTGTCCTG-AATCTTAGCCTTCACATTCTCAATGGTATCGGATGGCTCCAC 2122716 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||||||||| | ||| || || || || ||||| Sbjct 2122715 CTCCAAGGTGATGGTTTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 2122668 >seq5292 Length=4599 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| ||||||||||| || || || ||||||||||| || || | Sbjct 1848 CCGCCACGCAGACGCAGTACCAAATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAGAC 1789 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || ||||| ||||| ||| | |||| | |||||||| || ||| Sbjct 1788 AGGGTGCGACCATCTTCCAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGGGGA 1729 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || ||||| || ||| || | || ||| | || | || || ||| | || || Sbjct 1728 ATACCTTCCTTGTCCTG-AATCTTAGCCTTCACATTCTCAATGGTATCGGAAGGCTCCAC 1670 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || |||||||| | ||| || || || || ||||| Sbjct 1669 CTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATTTGCAT 1622 Score = 107 bits (118), Expect = 1e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || |||| |||||| || || || || || || || || || | Sbjct 252 CCACCACGCAGACGGAGGACCAGATGAAGGGTCGACTCCTTCTGGATATTGTAGTCAGAC 193 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || ||||| ||||| ||| | |||| | |||||||| || ||| Sbjct 192 AAAGTGCGGCCATCTTCCAGTTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGTGGA 133 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTT-TCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| || ||||| ||| || | | | ||| || | || || ||| | || || Sbjct 132 ATTCCCTCCTTATCTTG-AATCTTGGCCTTAACGTTCTCAATGGTATCGGAAGGCTCAAC 74 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| || || || || || || |||||||| || ||||||||||| Sbjct 73 CTCCAGAGTGATGGTCTTTCCCGTCAAAGTTTTAACGAAGATCTGCATTTT 23 >seq6836 Length=4525533 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || |||| |||||| || || || || || ||||| || || | Sbjct 2206226 CCACCACGCAGACGGAGGACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 2206285 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || |||||||| | |||| | |||||||| || ||| Sbjct 2206286 AGAGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGGGGA 2206345 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| |||||||| | || || ||| | || | ||||| || | || || Sbjct 2206346 ATACCCTCCTTGTCTTGGATCTTGGCCTTAACATTCTCAATGGTGTCCGAGGGCTCAACC 2206405 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | ||| || || |||||||| || || || || || |||||||| || Sbjct 2206406 TCCAAAGTGATGGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCATATT 2206455 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || |||| |||||| || || || || || ||||| || || | Sbjct 2205998 CCACCACGCAGACGGAGGACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 2206057 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || |||||||| | |||| | |||||||| || ||| Sbjct 2206058 AGAGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGGGGA 2206117 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| |||||||| | || || ||| | || | ||||| || | || || Sbjct 2206118 ATACCCTCCTTGTCTTGGATCTTGGCCTTAACATTCTCAATGGTGTCCGAGGGCTCAACC 2206177 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || || |||||||| || || || || || |||||||| Sbjct 2206178 TCCAAAGTGATGGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 2206224 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| || | || || || || || ||||| || || | | ||||| Sbjct 2204641 ACGGAGCACCAAGTGCAAAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCC 2204700 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || |||||||| | |||| | |||||||| || ||||||||||| || Sbjct 2204701 ATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGGGGAATACCCTCCTT 2204760 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || || ||| |||| | ||||| || | || || || | || || Sbjct 2204761 GTCTTGGATCTTGGCCTTAACATTTTCAATGGTGTCCGAGGGCTCGACCTCCAAGGTGAT 2204820 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||||||| || || || || || |||||||| Sbjct 2204821 GGTTTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 2204856 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || |||| |||||| || || || || || ||||| || || | Sbjct 2205314 CCACCACGCAGACGGAGGACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 2205373 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || |||||||| | |||| | || ||||| || ||| Sbjct 2205374 AGAGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGATCTGGGGGA 2205433 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| ||||| || | || || ||| | || | ||||| || |||| || Sbjct 2205434 ATACCCTCCTTGTCCTGGATCTTGGCCTTAACATTCTCAATGGTGTCCGAGGGTTCGACC 2205493 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||||||||| || || || || || |||||||| Sbjct 2205494 TCCAAGGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 2205540 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || |||| |||||| || || || || || ||||| || || | Sbjct 2205770 CCACCACGCAGACGGAGGACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 2205829 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || |||||||| | |||| | |||||||| || ||| Sbjct 2205830 AGAGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 2205889 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| || || || | || |||||| | || | ||||| || | || || Sbjct 2205890 ATACCCTCCTTATCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCCGAGGGCTCGACC 2205949 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||||||||| || || || || || |||||||| Sbjct 2205950 TCCAAGGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 2205996 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || |||| |||||| || || || || || ||||| || || | Sbjct 2204858 CCACCACGCAGACGGAGGACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 2204917 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || |||||||| | |||| | |||||||| || ||| Sbjct 2204918 AGAGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGGGGA 2204977 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| ||||| || | || || ||| | || | ||||| || | || || Sbjct 2204978 ATACCCTCCTTGTCCTGGATCTTGGCCTTAACATTCTCAATGGTGTCCGAGGGCTCGACC 2205037 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||| ||||| || || || || || |||||||| Sbjct 2205038 TCCAAGGTGATGGTTTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 2205084 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || |||| |||||| || || || || || ||||| || || | Sbjct 2205086 CCACCACGCAGACGGAGGACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 2205145 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || |||||||| | |||| | |||||||| || ||| Sbjct 2205146 AGAGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 2205205 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| || || || | || |||||| | || | ||||| || | || || Sbjct 2205206 ATACCCTCCTTATCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCCGAGGGCTCGACC 2205265 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||| ||||| || || || || || |||||||| Sbjct 2205266 TCCAAGGTGATGGTTTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 2205312 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||| || |||| |||||| || || || || || ||||| || || | Sbjct 2205542 CCACCACGCAGACGGAGGACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 2205601 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || |||||||| | |||| | |||||||| || ||| Sbjct 2205602 AGAGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGGGGA 2205661 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| ||||| || | || || ||| | || | ||||| || | || || Sbjct 2205662 ATACCCTCCTTGTCCTGGATCTTGGCCTTAACATTCTCAATGGTGTCCGAGGGCTCGACC 2205721 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||| ||||| || || || || || |||||||| Sbjct 2205722 TCCAAGGTGATGGTTTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 2205768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385187082469581