Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq6840 100 3e-16 >seq6840 Length=32352404 Score = 100 bits (110), Expect = 3e-16 Identities = 152/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 5333 AGAAGCACTCGCAGATGAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTCTCTT 5392 ||| || ||||| |||| ||| || | ||||||||| || ||| ||||| || | | Sbjct 674909 AGATGCGTTCGCATATGAACTGGGCAATGCGGTCGCCATGCTTCACTTCGAAG-TC-CGT 674966 Query 5393 GGCCGAAG--TTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCC 5450 | |||| |||||||| || || || | || || || | ||| |||||| || || Sbjct 674967 GTCCGAGTGATTGAAGAGGACAACACCTAAATTTCCGCGATAATCCTCGTCCACAACACC 675026 Query 5451 CGCTCCCACATCCACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTA 5510 || |||||||| | ||||| ||||| || || ||||| | ||| || ||||||||||| Sbjct 675027 GGCGCCCACATCGATAAAGTTCTTTACGGCCAGCCCGGAACGCGGTGCTACGCGACCGTA 675086 Query 5511 GCAGCCGTATGGCGGGTGGATCTGCAGATCGGT 5543 |||| | ||| || | ||||||||| || Sbjct 675087 AGAGCCTTCCGGCACCTGCACCTGCAGATCCGT 675119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447772906544760