Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq6840 132 6e-26 >seq6840 Length=32352404 Score = 132 bits (146), Expect = 6e-26 Identities = 287/426 (67%), Gaps = 24/426 (6%) Strand=Plus/Plus Query 146919 CAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCC 146978 |||||| | ||| || ||| |||||||| || || ||||| || || ||||| || || Sbjct 15164143 CAGGGGATTCACATGATTGTTATAGACGTGAGCATCGCCCAGCGTATGGACAAAATCGCC 15164202 Query 146979 CGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTT 147038 ||||| | ||| ||||| ||||| | ||||||||| | || | || ||| ||||| Sbjct 15164203 GGGCTTCAAGCCCGTCACATGGGCGATCATGTAGGTCAACAAGGCATACGAGGCGATGTT 15164262 Query 147039 GAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCC 147098 ||| || || ||||| |||||||| | | ||| ||||| ||||| || | || || Sbjct 15164263 GAAAGGCACTCCCAGACCCATGTCGGCGCTGCGCTGATACAGTTGGCAGGACAATTCACC 15164322 Query 147099 ----GTCGGCCA--CGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGG 147152 | | || | | || ||||| |||| |||||||||||||| |||||| ||| Sbjct 15164323 ACGCGACTGCGAAACATAGAACTGCGCCAGGCAGTGGCACGGCGGCAACGCCATTTGGGG 15164382 Query 147153 CAGGTCCGCGGGGTTCCAGGCCGAGA--------CCACCAGCCGCCTGCTCTCGGGGTTC 147204 | |||| || ||||| || || | | || | ||||| | || ||| Sbjct 15164383 TATGTCCAAAGGATTCCATGCGGACATTATGATGCGACGATCCGCCGGATC-----GTTG 15164437 Query 147205 CTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTC 147264 | || | ||||| ||| ||||||| || | |||||||| |||| | ||| Sbjct 15164438 CGTATAGT---ATCGATGACCTGTTTCAGCTGATCAATACCCTGGCCGGTGTAG-TCGTC 15164493 Query 147265 -CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAG 147323 ||| | | || | || |||||||| | |||||||||||| || ||||| ||||| Sbjct 15164494 GGTGCATTTACCATATTTTGCGCCAAAGTGACGCCACTGGAAGCCATATACTGGACCCAG 15164553 Query 147324 GTCGCC 147329 || || Sbjct 15164554 ATCACC 15164559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583438104482400