Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq6839 105 2e-17 >seq6839 Length=26866924 Score = 105 bits (116), Expect = 2e-17 Identities = 120/160 (75%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 ||| | |||| || | | || || |||| || || ||| | || ||||| |||||||| Sbjct 3409876 CTTTGGCGAGAGAATCATTGCGTTCGCTGCCGTGGAGGGAATCTTCTTTAGTGGCAGCTT 3409817 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 | ||||| ||||| ||| |||| || ||||| || |||| |||||||||||| || | Sbjct 3409816 T-GCCTCGATCTTTTGGCTGAAGAAACGTGGTCTGATGCCCGGTCTGACCTTCTCCAATG 3409758 Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGC 443858 | ||||| || |||||||| |||||||| ||||| || Sbjct 3409757 AGTTGATCTCACGCGACGAGGGCTTGCATTGTGACTTTGC 3409718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588196781853245