Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq6840 129 7e-25 >seq6840 Length=32352404 Score = 129 bits (142), Expect = 7e-25 Identities = 380/574 (66%), Gaps = 10/574 (2%) Strand=Plus/Plus Query 104692 GTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 |||| ||||||||||| | || | ||||| || ||||| || ||||| | ||||| | Sbjct 31471857 GTGCACGCGATCTCTTTTTTGCATTGTGGATACCTGATCTTTTTATGAAACGTGTTGAAG 31471916 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810 | || | ||||| | | |||||| | || ||||| ||| | |||| || Sbjct 31471917 CTAATGAAGACTGGTCATTGATGTGTCCACATAAATGCCCTGGCCTCCCAGATGTTTGGG 31471976 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870 |||| || |||||| ||| || | || || || ||| || || |||| | ||| Sbjct 31471977 GTGAAGATTTTGAAAACCTCTATATCAAATATGAACGAGAGGGACGAGCGAAT-CGAGTT 31472035 Query 104871 -TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | |||| | | ||| || || || | |||||| ||||||||||| || Sbjct 31472036 ATTAAAGCTCAATCTCTTTGGTTTGCCATCATCGAATCTCAAGTAGAGACTGGTACTCCT 31472095 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 |||||| | | || ||| | |||||| ||| || || ||| | ||| | || || Sbjct 31472096 TACATGTTATTTAAGGACTCTTGTAACAGAAAAAGCAACCAACAAAATGTTGGAACTATA 31472155 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 || | ||||| || |||||||| | |||| | | | |||||| | |||||| Sbjct 31472156 AAATGCAGTAATCTGTGCACAGAAATAGTTGAATATTCGGCACCAGATGAAATAGCTGTG 31472215 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGAT 105109 ||||| | || |||||||| || | || ||| || ||| || ||| | | ||| Sbjct 31472216 TGTAATTTGGCGTCAATCGCACTTAATATGTTTGT-GACGCAG-GAGAAA-TCTTATGAC 31472272 Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169 | | |||| || | || || || |||| || || |||||| |||| | | | |||||| Sbjct 31472273 TTTAAAAAGCTTAAAGATGTAACTAAAATCGTTACGAAAAACTTAAATAAAATAATTGAT 31472332 Query 105170 AGAAATTTTTACCCCGTTG--AGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227 | ||||| || ||| ||| ||| ||| ||||||||| | | |||||||| |||| Sbjct 31472333 ATAAATTACTA-CCCTTTGCCAGA-AGCTAAAAAATCTAATTTACGTCACCGTCCTATTG 31472390 Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT 105261 || | || || || || | ||||| | ||| || Sbjct 31472391 GTATTGGAGTCCAAGGGTTTGCGGACGCATTAAT 31472424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583210923910840