Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq6840 82.4 6e-11 >seq6840 Length=32352404 Score = 82.4 bits (90), Expect = 6e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 118480 TGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGT-AAGCCC 118538 ||||| ||||||| |||||||| || | ||||| | || || || || | |||||| Sbjct 15164156 TGATTGTTATAGACGTGAGCATCGCCCAGCGTATGGACAAAATCGCCGGGCTTCAAGCCC 15164215 Query 118539 TGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACC 118598 |||| || || |||||||| |||||||| || ||| | || ||||| || || Sbjct 15164216 -GTCACATGGGCGATCATGTAGGTCAACAAGGCATACGAGGCGATGTTGAAAGGCACTCC 15164274 Query 118599 CAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGA 118637 |||||||||||| || | ||| |||| |||||| || Sbjct 15164275 CAGACCCATGTCGGCGCTGCGCTGATACAGTTGGCAGGA 15164313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414442243126324