Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq6840 86.0 5e-12 >seq6840 Length=32352404 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/152 (74%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 29669 TAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGG-TTCTAGCCCGGTGACGTG 29727 |||||||||||||| ||||| || |||||||| || || || ||| ||||| || || || Sbjct 15164165 TAGACGTGAGCATCGCCCAGCGTATGGACAAAATCGCCGGGCTTCAAGCCC-GTCACATG 15164223 Query 29728 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCAT 29787 || |||||||| || | | | || ||||||||| || ||||| || || ||||| Sbjct 15164224 GGCGATCATGTAGGTCAACAAGGCATACGAGGCGATGTTGAAAGGCACTCCCAGACCCAT 15164283 Query 29788 GTC--CCCTGACCTCTGGTAGAGCTGGCACGA 29817 ||| | ||| | ||| || || ||||| || Sbjct 15164284 GTCGGCGCTG--CGCTGATACAGTTGGCAGGA 15164313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406129336270126