Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq6841 84.2 2e-11 >seq6841 Length=34148556 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/150 (75%), Gaps = 8/150 (5%) Strand=Plus/Minus Query 48541 CCAGAGATGGGTGACAAGTTTGCGTC-CTTCACGGCGCAAAAGGGGACATGTGGAGCCGT 48599 ||| |||| || |||||||| || || | |||||| ||| ||||| |||||||| | | Sbjct 13717983 CCACAGATTGGCGACAAGTTCGCCTCTCGTCACGG-GCAGAAGGGAACATGTGG---CAT 13717928 Query 48600 CCTG-ACC--CAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCAT 48656 || | | | |||||||||||||| ||| | || || ||| ||| || | ||||| Sbjct 13717927 CCAGTATCGTCAGGAGGACATGCCGTTCACCTGCGAGGGATTGGCGCCAGATATTATCAT 13717868 Query 48657 CAACCCCCACGCCTTTCCCTCCAGGATGAC 48686 ||| ||||||||| ||||||| | ||||| Sbjct 13717867 CAATCCCCACGCCATTCCCTCTCGTATGAC 13717838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369476392452671