Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2872 152 5e-32 >seq2872 Length=9359 Score = 152 bits (168), Expect = 5e-32 Identities = 348/524 (66%), Gaps = 0/524 (0%) Strand=Plus/Plus Query 16187 TGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCG 16246 |||| ||||| || ||| ||||| ||||| || ||||| || | ||| | |||| Sbjct 3263 TGTTGGAACATAAGCACCGCAAAGTCACAATGCAGACCTTCATCGCGAGAGATCAATTCG 3322 Query 16247 TTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAAT 16306 ||||| || || | || ||||| ||| || ||||| | |||||| || | ||||| Sbjct 3323 TTGGAGAATGTAAGTCCAGGCATAAGTCCACGCTTCTTCAGCCAGAAGATGGATGCAAAG 3382 Query 16307 GACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTA 16366 ||| ||||| || || ||||||| |||||||| || | ||||| | | | Sbjct 3383 CTCCCACTGAAGAAGATGCCTTCAACAGCAGCAAAAGCAATAATACGTTCACCAAAGTTG 3442 Query 16367 GCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATC 16426 ||| | || | ||||| | |||| || || || | || | | |||| Sbjct 3443 GCAGCCTTCGAAGAGATCCAAGAAAGAGCCCAGTCTGCCTTCCGCTTAACAGCCGGCATC 3502 Query 16427 GTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATC 16486 ||||| ||||| || || | | ||| | ||| ||| | ||||| || ||||| Sbjct 3503 GTTTCAATGGCATTGAAGAGATAGTCTCGCTGATGAGGATCCCTGATATAGGTGTCAATG 3562 Query 16487 AGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCAT 16546 || | |||||||||||| || || | ||||| ||||| ||||| || ||||| ||||| Sbjct 3563 AGCACACTGTACATTTCGGAATGCACATTCTCCATGGCAATCTGGAAGCCATAAAAGCAA 3622 Query 16547 CGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATA 16606 || ||||| | | || ||||| | ||| ||||| |||| || || || || || Sbjct 3623 CGTGCCTCGGTCACCTGCACTTCTTGGCTAAAACGTTCGACCAGATTTTCGTTAACAATT 3682 Query 16607 CCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTA 16666 || ||| |||||||| || ||||| | ||| ||||||| || | | ||| Sbjct 3683 CCATCAGAAGCAGCAAAGAAGGCCAACACATGCGATATGAAATGACGCTCATTATCCGTA 3742 Query 16667 AGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTC 16710 || | |||||| | | || ||||| | |||||||||||| Sbjct 3743 AGCTTGGCCCAATCAGTCATGTCCTTGGACAGATCCACTTCTTC 3786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511119665488600