Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq3808 138 9e-28
>seq3808
Length=15542
Score = 138 bits (152), Expect = 9e-28
Identities = 357/538 (66%), Gaps = 16/538 (3%)
Strand=Plus/Plus
Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848
||||| || || || | |||||||| |||||| | ||||||||||| || ||| |
Sbjct 5515 GGGGATCTGGGTCCGGTCTACGGCTTTCAGTGGCGTCATTTTGGAGCCGAGTATCGCACC 5574
Query 18849 TGTCAATCAAACTATTTACAG----CAAGGAATCGATCAGCTGCAAACTGTTATAGATAC 18904
|| | || | | ||||| ||||| |||||||||||||| || || |||||
Sbjct 5575 TG-CGATGA---TGACTACAGCGGACAAGGCATCGATCAGCTGCAGCAAGTGATTGATAC 5630
Query 18905 AATT-AAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATA 18963
||| |||||| ||| | || || || ||||| ||| | |||||||| |||||
Sbjct 5631 GATTCGAAACAATCCCTCGGA-TCGTCGTATCATTATGTCGGCGTGGAATCCCTTGGATA 5689
Query 18964 TCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTA--CGTTGCAAAC-- 19019
| ||| ||||| ||| ||||| || ||| || ||||| || || |||| |
Sbjct 5690 TACCCAAAATGGCACTGCCTCCTTGCCACTGCTTGGTGCAGTTCTATGTGTCGCAATCTC 5749
Query 19020 --GGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGT 19077
|| ||| | ||||| || | |||||| || | || ||||| || ||||| || |
Sbjct 5750 GAGGAGAACTCTCCTGTCATCTGTACCAGCGAAGTGCAGACATGGGGCTCGGGGTTCCTT 5809
Query 19078 TCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAA 19137
| ||||| || ||||| || || |||||||| | || ||||| || ||| | ||
Sbjct 5810 TTAACATCGCCTCTTATGCGCTGCTCACCTACATGATTGCCCATGTGACCGGATTGAAGC 5869
Query 19138 CCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTT 19197
| || || || | || || ||||| ||| | ||| | || | |||||| | || | |
Sbjct 5870 CTGGTGACTTTGTCCACACCATGGGAGATTCTCATGTGTATCTTAATCATGTGGAACCAT 5929
Query 19198 TAAAAGTGCAGCTAGCTCGATCCCCAAAACCTTTTCCTTGCCTTAAAATTATTCGAAATG 19257
| || ||| ||| || || || |||||| ||||| |||| || | |
Sbjct 5930 TGCAACAGCAACTAAAGCGGCAGCCTCGTCCATTTCCTAAGCTTAACATTAAGCGGCAGG 5989
Query 19258 TAACAGATATAAACGACTTTAAATGGGACGATTTTCAGCTTGATGGATATAATCCACA 19315
| ||| |||| | |||||| | || |||||| | | | |||||| ||||| ||
Sbjct 5990 TCACAAATATTGAAGACTTTCGTTATGAAGATTTTGAAATCGTTGGATACAATCCTCA 6047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399279516829725
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |