Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_001901.1
Length=46375
Score E
Sequences producing significant alignments: (Bits) Value
SEQ43492 192 2e-44
>SEQ43492
Length=1174
Score = 192 bits (212), Expect = 2e-44
Identities = 279/390 (72%), Gaps = 12/390 (3%)
Strand=Plus/Minus
Query 14277 GGAGGGGGATTTACGCACTATTCAGCCGCGCGGGGAACTGCCGCTACTGGAGCGCCCGTT 14336
|||||| || || | || || ||||||||||||| |||||| | | |||| | |
Sbjct 909 GGAGGGTGACTTGAGAACGATCATGCCGCGCGGGGAATTGCCGCGGATAGGTCGCCAGGT 850
Query 14337 CGTGCTTGGCCACTTTGATTGCTGGGGGCTGGTCATGAGCTATTTCCGGCAGACCCACGG 14396
|||||| || || || |||||||||||| | |||||||||||||||||| |||||
Sbjct 849 CGTGCTGGGGCATACCGACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAGCACGG 790
Query 14397 TATCGAACTCCATGATTACCGCGTCGACTATCCCTGGTGGGAGAACAGCTATCCGGACAA 14456
|| | ||||| ||||||||||| || ||||| ||||||||| || || ||
Sbjct 789 CATAGCGCTCCAGGATTACCGCGTTGATTATCCGTGGTGGGAGCGGGGC------GAAAA 736
Query 14457 CTTCTATCAGGACTGCTGGTACGAGTGCGGATTCAGGGAGTTTGACGGCCCGCCTCAGGA 14516
|||| |||| |||| |||| ||||| || ||||||| |||||||| || |
Sbjct 735 TCTCTACATGGACAACTGGCACGACTGCGGTTTTCGGGAGTTCGACGGCCCACCGATGCC 676
Query 14517 AGGGGACCTCGTCATCATGCAGGTGCAGGCGGATAAGTG--GAACCATGCCGGAATATTG 14574
|| ||| | || || |||| ||| || | ||| |||||||||||| || ||
Sbjct 675 GGGTGACATGGTGATTATGCTGGT--TTCCGCACCGGTGGCGAACCATGCCGGTATTCTG 618
Query 14575 CTGGAAGGTAACATGCTGCTGCACCATCTTTACGGGCAT-CTGAGCCAGCGCGTGCCGTA 14633
|| |||| | ||| |||||| ||| | ||| ||||| ||||||||||| ||||| ||
Sbjct 617 CTTGAAGATGGTATGTTGCTGCCCCACATGTAC-GGCATGCTGAGCCAGCGGGTGCCTTA 559
Query 14634 TGGTGGCTACTGGCAGGAGCGCACGATGAA 14663
||||| || ||| | ||||| || ||||
Sbjct 558 CGGTGGTTATTGGAAAGAGCGAACTGTGAA 529
Score = 132 bits (146), Expect = 1e-26
Identities = 141/185 (76%), Gaps = 6/185 (3%)
Strand=Plus/Minus
Query 13988 AGAAAACCATTGATGCCATCATGGCGCACGCCGCTGCGGAATATCCGCGCGAGTGCTGCG 14047
|||||||||| | || || ||||||||||||| || || |||||| ||||||| ||||
Sbjct 1121 AGAAAACCATAGCGGCTATTATGGCGCACGCCGAGGCTGAGTATCCGTGCGAGTGTTGCG 1062
Query 14048 GCGTGGTAGCGCAGAAAAGCCGGGTTGAGCGCTATTTCCCCTGCCGCAACCTCTCAGCCG 14107
|| | || ||||||||| ||| |||||||| || || |||||||| || || | | |
Sbjct 1061 GCATCGTGGCGCAGAAATCCCGCGTTGAGCGTTACTTTCCCTGCCGTAATCTGGCGGACA 1002
Query 14108 AGCCGACAGAGCATTTTCACCTTTCTCCTGAAGACTACG---CAGCTGCCGAGGACTGGG 14164
| || || ||||| |||||||| || || || || || | | ||||||||| ||||
Sbjct 1001 ATCCCACCGAGCAGTTTCACCTGTCACCAGAGGATTATGTGCCCGCTGCCGAG---TGGG 945
Query 14165 GGACG 14169
|||||
Sbjct 944 GGACG 940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148197218039370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |