Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value SEQ43492 192 2e-44 >SEQ43492 Length=1174 Score = 192 bits (212), Expect = 2e-44 Identities = 279/390 (72%), Gaps = 12/390 (3%) Strand=Plus/Minus Query 14277 GGAGGGGGATTTACGCACTATTCAGCCGCGCGGGGAACTGCCGCTACTGGAGCGCCCGTT 14336 |||||| || || | || || ||||||||||||| |||||| | | |||| | | Sbjct 909 GGAGGGTGACTTGAGAACGATCATGCCGCGCGGGGAATTGCCGCGGATAGGTCGCCAGGT 850 Query 14337 CGTGCTTGGCCACTTTGATTGCTGGGGGCTGGTCATGAGCTATTTCCGGCAGACCCACGG 14396 |||||| || || || |||||||||||| | |||||||||||||||||| ||||| Sbjct 849 CGTGCTGGGGCATACCGACTGCTGGGGGCTGATTATGAGCTATTTCCGGCAGGAGCACGG 790 Query 14397 TATCGAACTCCATGATTACCGCGTCGACTATCCCTGGTGGGAGAACAGCTATCCGGACAA 14456 || | ||||| ||||||||||| || ||||| ||||||||| || || || Sbjct 789 CATAGCGCTCCAGGATTACCGCGTTGATTATCCGTGGTGGGAGCGGGGC------GAAAA 736 Query 14457 CTTCTATCAGGACTGCTGGTACGAGTGCGGATTCAGGGAGTTTGACGGCCCGCCTCAGGA 14516 |||| |||| |||| |||| ||||| || ||||||| |||||||| || | Sbjct 735 TCTCTACATGGACAACTGGCACGACTGCGGTTTTCGGGAGTTCGACGGCCCACCGATGCC 676 Query 14517 AGGGGACCTCGTCATCATGCAGGTGCAGGCGGATAAGTG--GAACCATGCCGGAATATTG 14574 || ||| | || || |||| ||| || | ||| |||||||||||| || || Sbjct 675 GGGTGACATGGTGATTATGCTGGT--TTCCGCACCGGTGGCGAACCATGCCGGTATTCTG 618 Query 14575 CTGGAAGGTAACATGCTGCTGCACCATCTTTACGGGCAT-CTGAGCCAGCGCGTGCCGTA 14633 || |||| | ||| |||||| ||| | ||| ||||| ||||||||||| ||||| || Sbjct 617 CTTGAAGATGGTATGTTGCTGCCCCACATGTAC-GGCATGCTGAGCCAGCGGGTGCCTTA 559 Query 14634 TGGTGGCTACTGGCAGGAGCGCACGATGAA 14663 ||||| || ||| | ||||| || |||| Sbjct 558 CGGTGGTTATTGGAAAGAGCGAACTGTGAA 529 Score = 132 bits (146), Expect = 1e-26 Identities = 141/185 (76%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 13988 AGAAAACCATTGATGCCATCATGGCGCACGCCGCTGCGGAATATCCGCGCGAGTGCTGCG 14047 |||||||||| | || || ||||||||||||| || || |||||| ||||||| |||| Sbjct 1121 AGAAAACCATAGCGGCTATTATGGCGCACGCCGAGGCTGAGTATCCGTGCGAGTGTTGCG 1062 Query 14048 GCGTGGTAGCGCAGAAAAGCCGGGTTGAGCGCTATTTCCCCTGCCGCAACCTCTCAGCCG 14107 || | || ||||||||| ||| |||||||| || || |||||||| || || | | | Sbjct 1061 GCATCGTGGCGCAGAAATCCCGCGTTGAGCGTTACTTTCCCTGCCGTAATCTGGCGGACA 1002 Query 14108 AGCCGACAGAGCATTTTCACCTTTCTCCTGAAGACTACG---CAGCTGCCGAGGACTGGG 14164 | || || ||||| |||||||| || || || || || | | ||||||||| |||| Sbjct 1001 ATCCCACCGAGCAGTTTCACCTGTCACCAGAGGATTATGTGCCCGCTGCCGAG---TGGG 945 Query 14165 GGACG 14169 ||||| Sbjct 944 GGACG 940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148197218039370