Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value SEQ17778 138 2e-27 >SEQ17778 Length=11298 Score = 138 bits (152), Expect = 2e-27 Identities = 187/263 (71%), Gaps = 4/263 (2%) Strand=Plus/Minus Query 202750 AAATAAATCAACATCAAATTTACGTCTACATCCTTCATAACTCATATATCTAATTTTACC 202809 |||| || |||||||||||| ||| ||||||| | ||| ||||||| | ||| || || Sbjct 4260 AAATGCATTAACATCAAATTTTCGTTTACATCCCTGATAGTTCATATAGCGAATCTTGCC 4201 Query 202810 AAATATTGGTCTTTCTTTCCATGCTCTATCATGAATACCACAAATTGACCACATACATCC 202869 ||||| | | || |||||||| ||||||| ||||| | | |||||||| || || Sbjct 4200 GAATATAGCACGCTCCTTCCATGCGTTATCATGGATACCCCCGACAGACCACATGCAGCC 4141 Query 202870 AACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCATTTA--AATNNNNNNNN 202927 ||||| || || ||||| || ||||| | | ||||| || || | ||| Sbjct 4140 CACATAACCGTTGGGATCGCGGCCATCCAGACTGTATTTGTCGTTCAGCAAT--ATGCTA 4083 Query 202928 NNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATT 202987 | || | ||||||| || ||||||||| | ||| || || |||||||||||| Sbjct 4082 TACTCCAGCGCCTGCTCTGGTGTTTCTGTCCATTCAAGTATCTTCTTGGCCCAATACATT 4023 Query 202988 CTTAAATATCCATGCATTTTACC 203010 || | | ||||||||||||| || Sbjct 4022 CTCAGAAATCCATGCATTTTGCC 4000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755020621264000