Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq4710 102 5e-17
seq4983 95.1 8e-15
>seq4710
Length=78879
Score = 102 bits (112), Expect = 5e-17
Identities = 160/228 (70%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTT-TCTTTCTGTATGTTGTAGTCGGA 34221
|| || ||||| | |||||||| ||| || | | || ||||| ||||||||||| ||
Sbjct 8603 CCACCACGCAGACGCAGCACCAAGTGCAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGA 8662
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
||| || | || |||| ||||||||| ||||| ||||| |||||||| || |||
Sbjct 8663 CAGAGTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGATCTGGGGG 8722
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | |||||||| ||||| ||| | || | || | ||| | | || ||
Sbjct 8723 GATTCCTTCCTTGTCTTGGATCTTAGCCTTCACATTCTCAATGGTATCAGATGGCTCCAC 8782
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| |||||||| || || || || || ||||| ||||| |||||
Sbjct 8783 CTCCAGGGTGATGGTCTTTCCAGTCAGGGTCTTCACGAAGATTTGCAT 8830
>seq4983
Length=3163
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||||||| ||| | || || ||||| ||||||||||||||
Sbjct 644 CCACCACGCAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAG 703
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || ||||||||||| || ||||| || | |||||||| || |||
Sbjct 704 AGGGTACGACCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 763
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | || | ||| | | || ||
Sbjct 764 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTATCAGAGGGCTCAACC 823
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || ||||| ||||| || | || || ||||||||||||||
Sbjct 824 TCCAAGGTAATGGTCTTGCCAGTCAATGTCTTTACAAAGATCTGCAT 870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322890464328800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |